Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2443 ATGGATCCCTCTAGAATTTCTGTCCGCCCATTCAACCTCTTTGATGCCGAAGACTTCCTGAAATGGGCCAGTGACGACAGAGTGACCCAATACCTGAGATGGAACTCCATCACCACTAAAGAAGAAGCTCTCGCATATCTAGAGAAGGTTGCTATACCCCATCCATGGCGTCGATCTATATGTTTGGATGACCGGACCATCGGATACGTGTCGGCCAAGCCGGAGTCCGGCGATTACCGTTGCAGGGCACATGTCAGCTACGCGGTGGCTGTCGACCACTGGGGAAAAGGGATAGTCACACAGGCTTTAAGGATGGCTGTCCCTATGGTTTTCGAACAATTCCCAGAAGTGCTTAGGCTCGAGGCTCTGGTGGATTCGGAGAATAAAGGGTCTCAGAGGGTACTCGAGAAAATAGGGTTTGCAAAGGAAGGGATGCTGAGGAAGTATGGGTTTTGTAAGGGTGAGATTAGGGATTTCCTTATCTACAGCTTCTTGGCTACGGATAACCTATTATGA 516 0.4961 MDPSRISVRPFNLFDAEDFLKWASDDRVTQYLRWNSITTKEEALAYLEKVAIPHPWRRSICLDDRTIGYVSAKPESGDYRCRAHVSYAVAVDHWGKGIVTQALRMAVPMVFEQFPEVLRLEALVDSENKGSQRVLEKIGFAKEGMLRKYGFCKGEIRDFLIYSFLATDNLL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2443 171 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 167 IPR000182 GO:0016747
Glsi12g2443 171 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 165 IPR016181 -
Glsi12g2443 171 Gene3D - 2 165 - -
Glsi12g2443 171 Pfam Acetyltransferase (GNAT) domain 5 140 IPR000182 GO:0016747
Glsi12g2443 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2443 Glsi-ChrGlsi12 38556760 38557275 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi12g2443 Acetyltransf_3 3.1e-22 CL0257