Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2429 ATGGACATGGATATGGACATTCCCCTTCCAGAAGAGCTCGAATTGCTGGAATCCGATACTCAACTTTTCGAAGACTACCCAGACCTGGAGCCACCGGAACCCTACCCGGAGGAAGACCAAGAGGCGCCACCAGCAGTACATTTGCCACCGTCCCCAGATCTTCAATTCGTTTCCGAGGTCCAAATCAGTGGACACAAGCGTTTGAGGTCCGGCAGTCCTGATGGGTCACTTTCAGAAGCCGTGGGGTCGTCAGAGGAAAAAAGGAGCAGGACTGACGATTCAGTGCGGGAGACTAATGAGGACTGGCTTCGCTACTCGCCACCCAAGGGGATCGATCCTGTAGTATCAGAACGAGTGAGCGTTGTGAAGGAGAAGATGTTATCCAGGTATGCATCAGAAATTGATGGGGAGTGTATATCAGCCACTGCACCCAACGGTGACAGGGTTTATGCGAAGATGAATAGAATGAAAGGGGAGGAACGGTTGAAGAAATTGGATGTGAGAGCAAATTCTGATGCTCTTTTATTAGAACCCATTAATATTCTATTTGAGAAATTGGAGCAAGAGGCTTTCACTAAGACCTTGAAAGCTAGTTCTGAATGCCAAAGTGTTCCGGATGTTCCTGAAACACCAGTGGTCCATGAGCAACTTTGGGTAGATAAATATGCTCCAAAATCATTTACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCTTGTGGTTGAAGCAATGGGATTCTAGTGTATTTGGATCCGAGATTCGAAGTACGTCAGATGAGGTTTTGTCTGCTTTGAAACGACATTCCACTATTGCTCAACGTCAGAAACCTTTAGATTCAAAGTTTCCAAGGATGAACAGAGGACCCAATTGGAGTAACAGTAGATATAGACATTCTAGCAGTATGGATGAAGCCGGTAATTCAAAGAGCATTCAGGATATGCTGAATAAAAAGGAAAAGCATGTCGGTCCACCAGAACAGAAGATACTTTTGCTTTGTGGTCCACCGGGCCTTGGAAAAACTACTCTAGCACATATAGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCCAGTGATGATCGTAGTACATCAACAATTGAAGCCAAAATCCTTGACGTGGTTCAGATGAATTCTGTCATGTCTGATTCAAGACCAATGTGTCTGGTGGTGGATGAAATTGATGGAGCACTTAATGATGGCAAGGGTGCTGTGGAGGTTCTTCTAAAGATGGTTTCTGCCGAAAAGAAGTCTGACACGGGAAAGGACAATTTGGCAAAAGGACAACTGGGAAGGAAGTCCTCAAAGAAGGGCCGTAATACAGCATCACTGTCAAGACCTGTAATTTGCATTTGTAATGACCTATACGCACCTGCCTTGAGACCATTGCGTCAGGTAGCAAAGGTTCACATATTTGTTCAACCAACAGCTAGTCGTGTGGTAAGCAGGCTCAAATATATATGCAACAAGGAGGGCATGAAAACTAATGCCTTTGCACTTACTGCTCTGGCAGAATATACTGAATGTGACATACGCTCATGCTTAAATACTCTCCAATTTCTCAGCAGGAAGAAAGAAACCCTCAATGTGTTCGATATTGGTTCTCAAGTAGTTGGCAGGAAAGACATGTCAAAGAACGTTCTAGACATCTGGAAAGAGATTTTCCAAAGGAAAAGAACAAAAGCGGAAAGAAAATCTCATAATAGCATGTCCTTCGAATTTAACCCCTTGTACTCCCTTGTATCAAACCGTGGTGACCGTGACTTGATTCTTGATGGAATTCATGAAAACATTTTGCAGCTCCATTATCATGATCCAGTGATGCAGAAAACCGTCAAGTGCTTGAATAGTCTAGGAGTTTCTGATCTACTGCATCAATATATTATGCGTACGCAACAAATGCCTCTTCAGGTTTATTTTCCGCCCATAGCAATTACTGTACATCGTATGGTAGCTCAAGTTCAAAAGCCTAACATTGAGTGGCCAAGGTCCTATCAAAGGTGTCGAACAATGATGATGGAAAAGATGGACATTTTGAATACTTGGCACTACAAAATTCCACCACATATTGCAAGGCATTTATCAGCTAGTTCCTTTGTTGAGGACTTAATTTCTCCATTGTTACATATTCTGTCCCCTCCAACTATAAAACCGGTGTCTTTACAATTACTATCTGATAAAGAGAAAAATGATCTTGCTCAAGTAGTTAGCACAATGGTCTCTTACTCTTTAACATATAAGAATATAAAATCAGATATCCTGCCCAATAGCCTGAGACATGAAGTAGCAGACGACTTAAAATTATCTTTTGATCCCCCAATCAGTGACTTCATAAATTTTAAGGATTATACCTCAAATCATTATTGGCTTTCTTTAGCCATGAAGCAGATTCTCGTGCATGAGGTTGCAAAGGAAAGGATCTTGCAAGTAAATATTGACAGGCCTTTAGCAAATGGGTGCAGCAGTGGAGGGCATGAATTTATTGAGGCTGGAACTAGCAATGCCCAATCATCCAAAATCAATCACACAGCTGCATCTTCTGTGAAAAACATTCAAAATGGAAATACCAGCACCACGGTGTCACCAAAGTTGCATCCCGATAAAGGCACAAAAGGCAACGTGAAACTGTTAAGCACAGGAAGTATGAAAAAGCCATCCAGTGGTTCCTCACATTTTTTTGACAGGTTTATAAAGTTGAATAGTAAAGGTTTTCAAAATGAAGAAAAAAATGAACAGAAAGAAGCAACCTTGGAGAAGGATCCACGTCCATTACTGTTTAAATTTAATGAGGATTTCCATGCTCTTCATTGCAATACGGAAATATTCCTGCATGAGCGTTCTGCTATAAGGAATTTTATATTTGAAAACTTGCTATATCACACAAACACTCTGCTTAGCCGATTTGGAGCTAGTGTCTCTTCTTTCAGAACTTGGTGTGGTCTTTTGGTCATAAAGAGGGGTTTACAAATGCAGTCAAAAGGCCAGTTCGCATTCGAGAATTTCTACTCTGATGATTATGCTTTCTCCGCAAATAGTATGTACATGCGGATTTTGTAG 3069 0.4167 MDMDMDIPLPEELELLESDTQLFEDYPDLEPPEPYPEEDQEAPPAVHLPPSPDLQFVSEVQISGHKRLRSGSPDGSLSEAVGSSEEKRSRTDDSVRETNEDWLRYSPPKGIDPVVSERVSVVKEKMLSRYASEIDGECISATAPNGDRVYAKMNRMKGEERLKKLDVRANSDALLLEPINILFEKLEQEAFTKTLKASSECQSVPDVPETPVVHEQLWVDKYAPKSFTELLSDEHTNREVLLWLKQWDSSVFGSEIRSTSDEVLSALKRHSTIAQRQKPLDSKFPRMNRGPNWSNSRYRHSSSMDEAGNSKSIQDMLNKKEKHVGPPEQKILLLCGPPGLGKTTLAHIAARHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVMSDSRPMCLVVDEIDGALNDGKGAVEVLLKMVSAEKKSDTGKDNLAKGQLGRKSSKKGRNTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTASRVVSRLKYICNKEGMKTNAFALTALAEYTECDIRSCLNTLQFLSRKKETLNVFDIGSQVVGRKDMSKNVLDIWKEIFQRKRTKAERKSHNSMSFEFNPLYSLVSNRGDRDLILDGIHENILQLHYHDPVMQKTVKCLNSLGVSDLLHQYIMRTQQMPLQVYFPPIAITVHRMVAQVQKPNIEWPRSYQRCRTMMMEKMDILNTWHYKIPPHIARHLSASSFVEDLISPLLHILSPPTIKPVSLQLLSDKEKNDLAQVVSTMVSYSLTYKNIKSDILPNSLRHEVADDLKLSFDPPISDFINFKDYTSNHYWLSLAMKQILVHEVAKERILQVNIDRPLANGCSSGGHEFIEAGTSNAQSSKINHTAASSVKNIQNGNTSTTVSPKLHPDKGTKGNVKLLSTGSMKKPSSGSSHFFDRFIKLNSKGFQNEEKNEQKEATLEKDPRPLLFKFNEDFHALHCNTEIFLHERSAIRNFIFENLLYHTNTLLSRFGASVSSFRTWCGLLVIKRGLQMQSKGQFAFENFYSDDYAFSANSMYMRIL 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 878 892 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 1 37 - -
Glsi12g2429 1022 CDD HLD_clamp_RFC 479 537 - -
Glsi12g2429 1022 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 936 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 423 444 - -
Glsi12g2429 1022 FunFam Chromosome transmission fidelity protein 18 479 546 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 856 893 - -
Glsi12g2429 1022 Coils Coil 1019 1022 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 282 309 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 288 309 - -
Glsi12g2429 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 534 IPR027417 -
Glsi12g2429 1022 Pfam ATPase family associated with various cellular activities (AAA) 332 458 IPR003959 GO:0005524|GO:0016887
Glsi12g2429 1022 Gene3D - 215 477 IPR027417 -
Glsi12g2429 1022 SMART AAA_5 328 481 IPR003593 GO:0016887
Glsi12g2429 1022 Gene3D - 479 549 - -
Glsi12g2429 1022 CDD AAA 327 417 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 1 104 - -
Glsi12g2429 1022 MobiDBLite consensus disorder prediction 81 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2429 329 537 Core DNA Replication Machinery Family AT5G22010 29.018 2.44e-14 75.9