Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2403 ATGAGTCCTGCTGGTTCATCAAGATGGTCCCCGACTCAAGAACAGCTTATGATTCTGGAGGAAATGTATCGAGGTGGGACTAGAACTCCAAATGCTTCACAAATTCAGCACATCACAGCCCATCTTTCTTTCTATGGAAAGATTGAGGGCAAGAATGTGTTCTATTGGTTTCAGAACCACAAGGCAAGAGATAGACAGAAGCTCCGGAGAAAATTGAACAAGCAACTGCAGCTACAACAACAGCAACTCTACTATCAAGTTCAGCAGAATCAGAATTACAATCACCATTTTGTGGAGTCTCTTAGTGTTTATTCTACCCAACAACTTTCCTCATCTAACTCCGTTGCCTCGTTTTCAAAGGGAGGACCTGGAGGAGCATCAAAACATGGTATAAATTACACATGGACAGTGGATAATCCGGAGGGAGAGATGAAGAAGACAGTAATGAATAATTACAAGGAAGATTGGAGGATGATGATGGAAGTGGATGCAGCTTCTTCATATAGCCCTAGAGTACCCCTCAAGACTCTTGAACTATTCCCAGTCAGAGACAGGCTCAAAGAAGAGTGCTCCAAATCTAAGCCACTCTCTGAAACACACTAA 603 0.4279 MSPAGSSRWSPTQEQLMILEEMYRGGTRTPNASQIQHITAHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQLYYQVQQNQNYNHHFVESLSVYSTQQLSSSNSVASFSKGGPGGASKHGINYTWTVDNPEGEMKKTVMNNYKEDWRMMMEVDAASSYSPRVPLKTLELFPVRDRLKEECSKSKPLSETH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2403 200 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 194 IPR044555 GO:0003700|GO:0099402
Glsi12g2403 200 SMART HOX_1 4 71 IPR001356 GO:0003677
Glsi12g2403 200 CDD homeodomain 8 67 IPR001356 GO:0003677
Glsi12g2403 200 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Glsi12g2403 200 FunFam WUSCHEL-related homeobox 4 6 73 - -
Glsi12g2403 200 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Glsi12g2403 200 Gene3D - 6 72 - -
Glsi12g2403 200 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2403 Glsi-ChrGlsi12 38219911 38221457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2403 1 182 Wox Gene Family AT2G28610 40.586 1.16e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi12g2403 Homeodomain 1.4e-18 CL0123