Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2400 ATGTCGGCAATATTCATCAGAGTTGTTCTTATTCTATGTGTGTTCGTGCTGCTGGGAGTAACATGTGATGGAGGTTTTCTGATTCCAAAAGTAACAGTGATAATGGTTAATGATTTGGGAGGTGGTCTAGACCTGTCCCTTCATTGCAAATCTGGTGACGATGATGTTGGAGAGCATCTACTGCATCCTCATGACACCTCAGAGATCACTTTCAGGCCAAACTTCTGGGGCACCACAAAATTTAATTGCACCTTCCAATGGCAAGGTGCTTCTCACTGGTTTTATATATTCATAGTGAAGAGGGACCATGACAAATGCACCACTTGCATTTGGAGTATAAGGCCAGACAAGCCATGCATGTTCAGTAGGAAATCTGGTGCCTTTGACGATTGCTTTCCATGGAATAAAGTATAA 414 0.4251 MSAIFIRVVLILCVFVLLGVTCDGGFLIPKVTVIMVNDLGGGLDLSLHCKSGDDDVGEHLLHPHDTSEITFRPNFWGTTKFNCTFQWQGASHWFYIFIVKRDHDKCTTCIWSIRPDKPCMFSRKSGAFDDCFPWNKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2400 137 Pfam Plant self-incompatibility protein S1 32 134 IPR010264 -
Glsi12g2400 137 PANTHER - 28 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2400 Glsi-ChrGlsi12 38210891 38211304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2400 21 135 Carbohydrate Esterase AT3G16970 42.857 1.43e-28 100