Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2399 ATGGAGATTCTCATTCCACTGAAGCCAGTGTTATTATCCCTTGTAATTATCATTACGCTTCTGGAAGCTCCTTCCGTTGTTGTTTCCAATTATTATAAAGAAGTTGGAGGCAGAGAAGGAGAATTAGGTCTTCCCGCTCCAACACCGTTAACGACTATTCATGTGTTCAACTTACTGGGTGAAGGATTGAAGTTCAAAATTCACTGTAAATCCAAAGACGACGACCTTGGAGTTCATGTGGTTTCTCAAAACGGTGTGTATCAATGGAAGTTTCATCCTAATTATTTTGGCACAACCTTGTTCTTCTGTGATATAACTTGGAGAGATGGATCAACAGCGTATGCTATTTATAAAGCTAGTAGGGATTTCCGAAGATGCTCGACGCTGTGTGATTGGGATGTGACTAAAGAGGCTCTACTTGGTTATACACAAGATCCTCAAGAACAAGATATTACTGTAAAGTGGACAAAATCGATAACTTGA 483 0.3954 MEILIPLKPVLLSLVIIITLLEAPSVVVSNYYKEVGGREGELGLPAPTPLTTIHVFNLLGEGLKFKIHCKSKDDDLGVHVVSQNGVYQWKFHPNYFGTTLFFCDITWRDGSTAYAIYKASRDFRRCSTLCDWDVTKEALLGYTQDPQEQDITVKWTKSIT 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2399 160 PANTHER - 51 138 IPR010264 -
Glsi12g2399 160 Pfam Plant self-incompatibility protein S1 52 155 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2399 Glsi-ChrGlsi12 38203671 38204153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2399 45 156 Carbohydrate Esterase AT3G16970 35.000 7.45e-20 79.0