Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2376 ATGATTGTTTTGGATGCACAGGCTACTCATTTCATAGTTGGATCTCAAGTTTGGGTTGAGGACCCAGAGGTAGCTTGGATAGATGGAGAAATCGTGGAATCTGATGGCGAAGAGATCAAGGTTATCTGTACATCACAGAAGATGGTTGTGGTCAAAGCATCTAATGTCTATCCCAAGGATCCTGAGTTCCCTCCTAACGGTGTGGAGGATATGACAAGGCTGGCATATCTGCATGAACCAGGGGTTCTCCAGAATTTGAGATGCCGATATGATTTGAATGAAATATATACATACACAGGAAATATATTGATCGCTGTGAACCCTTTTCGAAGATTACCTCATTTGTATGACCATGATATGATGAAAAAGTATAAAGGGGCGGCTTTCGGTGAACTAAGCCCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGATAAATGAAGGAGCAAGCCAATCAATTTTGGTCAGTGGAGAAAGTGGAGCAGGTAAAACAGAGAGTACAAAGATGCTTATGCATTATCTTGCCTTTATGGGAGGGAGAGCAGCATCTGAGGGACGGTCTGTGGAGCAACAAGTTCTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGCTTCAATTTGATCAAAGGGGGAGAATTTCGGGAGCTGCCATAAGAACTTATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCGGATCCTGAGAGAAACTATCATTGTTTTTATATGCTTTGTGCTGCACCACAAGAGGATGTTGATAAGTACAAATTGGGAAATCCAAGAACATTTCATTACCTGAATCAATCGAATTTCTATGAGCTGGAGGGGCTGGATGAATCTAAGGAGTATCTTGCAACTAGGAGAGCTATGGATGTTGTTGGGATCAATTCTGATGAGCAGGATGCTATATTCCGAATAGTAGCTGCAATACTACATTTAGGAAACATTGAATTTGTGAAGGGGGAAGAGATGGACTCCTCTGAACCCAAAGATGACCGATCCCGTTTCCACCTGAAAACTGCAGCTGAACTTTTGATGTGTGACGAGAAGTCACTTGAGGACTCTTTGTGCAAACGTGTTATGGTGACACGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTCTGCAGCTCTCAGTAGAGATGCCTTGGCTAAAATAGTTTACTCAAGGCTGTTTGACTGGATTGTGAACAAGATTAACAACTCTATTGGTCAAGATCCAAATTCAAAGAACTTAATTGGAGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAACTTGACGAATGAGAAATTGCAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAAATTAATTGGAGTTACATAGAGTTTATTGATAATCAGGACGTTCTTGATCTCATTGAGAAGAAACCCGGTGGAATCATTGCTCTTCTGGATGAGGCGTGATCAACACATGAAACATTTGCTGAAAAGCTATATCAAACTTTTAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGACTTCACCGTTAGCCATTATGCTGGTGATGTCACTTACCAAACTGAGTTGTTCCTTGACAAGAACAAAGACTATGTTGTTCCAGAACATGAGGCACTGCTATGTGCTTCGAAGTGCTCCTTTGTTGCAGGGTTGTTTCCCCCTCTACCCGAGGAAACTTCCAAATCATCAAAGTTCTCTTCAATAGGCACTCGGTTTAAGCAACAACTACAAACTTTGCTTGAAACACTGAGTGCTACTGAGCCACATTACATTCGATGTGTAAAGCCAAATAATCTTCTAAAGCCAGGGATATTTGAGAACAGTAATGTGTTGCAGCAGCTTCAATGTGGGGTAAGTTCAATGCTGTTTTGGCCATGTTCTCAGGCTGCGAAGGAAACTGGTGCTCTCCAAGCTGCCAGAGATAAACTTGAAAAGGAAGTTGAAGCCAAGAGGCAGGAAAATGCAGAATTGAAATCTGCCCTGCAAGAGATGGAGCTTCAGTTCCAAGAGACTAAGGCACTGCTCATTCAGGAACGGGAGGAAGCAAAAAAAAGGGCTGAGCTAAATCCCAATATTCAAGAGTTTCCTGCTGTTGCTAATGATTTGATCAATAAGCTAACAGCAGAAAATGACCATCTCAAGGCACTGGTTAACTCATTGGAAAAGAAAACTGAAGAGACAGAGAGGAAAGGTGTAGCAAGTAACAAGGCGCTGCCCATTCAGGAACTTGAGGCAGCAAAGAAAGTAGCTGATCTATCTCCTAATATACACGAGTTTCCTGTTCTTGATAATGAATCAAACAATAAGCTTGCTGCAGAAAATGAACATCTCAAGGCACTGGTAAAGTCATTGGAAAGTAAATATGAAGAAGGTAACAAGCTTAGTGAAGAGCGCTTGAAGCAAGCTATGGAGGCAGAAACAAAGATAATTGAACTGAAGATGACTATGCAGAGGCTTGAAGAAAAACTCGCTGATATAGAAACGGAGGATCAAATTTTGAGGCAGCAGGCACTATTGAGTTCATCTTCTAGGAGAATGTCAGGACATTTGTCATTTAACGCAGCTCAGCCTTCGGAAAATGGTCATTATGATCCACAGAGTTCTCCAAGAAAAAAATTCGGTACAGAGGCAGATAAAGAGTTGAGGAGATCTCAAATTGAAAGGCAACATGAAAGTGTAGATGCTCTTATGAAATGTGTGGCTGGAAACCTTGGGTTCAGTGAAGGAAAACCAGTTGCAGCTTTTACCATGTATAAGTGTCTGTTTCACTGGAAATCTTTTGAAGCAGAAAAGACTGGTGTATTTGACCGTCTTATTAATTTGGTTGGTTCTGCTATAGAGGATCAGGACAATAATGATCATATGGCTTATTGGTTATCCAATACGTCTGCATTGTTATTTCTTCTCCAGCGAAGTCTTAAAACAACTACCGCGCAGAAACCTCCTCAGCCTTCAACATCTTTTTTTGGGAGAATGACACAAGGTTTTCGTGCATCTTCTGCCAATCTTTCCAGTAAGGCACTTGATGCAGTGCGCACGGTTGATGCCAAGGTTCCAGCTTTGCTTTTCAAGCAGCAGCTTACAGCATATGTGGAAAAGATATTTGGAATCATTCGAGAGAATTTGAAAAAGGACTTGTCGCCTCTGCTTTCTTCTTGCATTGAGGCACCGAGAACATCAAATGGAAGCGTGTCAGATGAACAGTCAAATGACAAGAGCTCATCAGCCGGATCTTGGCACAACATTATTAATTGCCTTAATAGATTTCTCAATATGCTGAAAGAAAATTATGTGCCTCCTATTCTAGTTCAGAAGATATTTACTCAGGTTTTTCAATACATCAATGTGCAACTCTTTAATAGCCTTCTTTCACATAAAGAATGCTGCACATTTAGCAATGGAGAATATTTAAAATCTGGGTTGGCTGAACTAGAAACATGGTGTTGTGAAGCAACAGGGGAGCAGTATGCTTCCTCATCTTGGGATGAACTCAAACATGTGAGGCAAGCAGTTGGACTATTGGTTATAAATGAGAAGACCAAAATATCCTATGATGGTCTTACTAATGACTTGTGCCCTATCCTGAGTGCCCATCAACTTTATAGAATTTGTACACTTTCCGGGGATGTCAATGACAATACACGAGGTGTCTCAGCAGATGCCAATGACAAGACACAAGGTGCATCAGCAGATGTCAATGACAAAAAACAAGGTGCATCAGCAGATGCCAATGACTATACACAAGCTGCATCAGCAGATGCCAATGACAATACACAAGCTGCATCAGCAGATGCCACTGGCGATACAAAAGGTGCATCAGCAGATGTCAATGACAATGAACAAAGTGTATCAGCAGATGTCATTTCAAGCTTGAAGCTTCTAATGACAGATGGTGCCAATGATGACTGCAACTCCTTCTTGTTAGATGATAATTCAAGTATTCCATTCTTGGTTGATGAGATTTCTAGTAACCTTCTAGATAAATCCCTTTCAAGAGTAAAACCGCCGGCAGAACTTCTTGAAAATTCAGCCTTCCAATTTTTGCAGGATTAA 4164 0.4095 MIVLDAQATHFIVGSQVWVEDPEVAWIDGEIVESDGEEIKVICTSQKMVVVKASNVYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLRCRYDLNEIYTYTGNILIAVNPFRRLPHLYDHDMMKKYKGAAFGELSPHPFAIADSAYRMMINEGASQSILVSGESGAGKTESTKMLMHYLAFMGGRAASEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDVDKYKLGNPRTFHYLNQSNFYELEGLDESKEYLATRRAMDVVGINSDEQDAIFRIVAAILHLGNIEFVKGEEMDSSEPKDDRSRFHLKTAAELLMCDEKSLEDSLCKRVMVTRGEAITKWLDPNSAALSRDALAKIVYSRLFDWIVNKINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEAXSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTVSHYAGDVTYQTELFLDKNKDYVVPEHEALLCASKCSFVAGLFPPLPEETSKSSKFSSIGTRFKQQLQTLLETLSATEPHYIRCVKPNNLLKPGIFENSNVLQQLQCGVSSMLFWPCSQAAKETGALQAARDKLEKEVEAKRQENAELKSALQEMELQFQETKALLIQEREEAKKRAELNPNIQEFPAVANDLINKLTAENDHLKALVNSLEKKTEETERKGVASNKALPIQELEAAKKVADLSPNIHEFPVLDNESNNKLAAENEHLKALVKSLESKYEEGNKLSEERLKQAMEAETKIIELKMTMQRLEEKLADIETEDQILRQQALLSSSSRRMSGHLSFNAAQPSENGHYDPQSSPRKKFGTEADKELRRSQIERQHESVDALMKCVAGNLGFSEGKPVAAFTMYKCLFHWKSFEAEKTGVFDRLINLVGSAIEDQDNNDHMAYWLSNTSALLFLLQRSLKTTTAQKPPQPSTSFFGRMTQGFRASSANLSSKALDAVRTVDAKVPALLFKQQLTAYVEKIFGIIRENLKKDLSPLLSSCIEAPRTSNGSVSDEQSNDKSSSAGSWHNIINCLNRFLNMLKENYVPPILVQKIFTQVFQYINVQLFNSLLSHKECCTFSNGEYLKSGLAELETWCCEATGEQYASSSWDELKHVRQAVGLLVINEKTKISYDGLTNDLCPILSAHQLYRICTLSGDVNDNTRGVSADANDKTQGASADVNDKKQGASADANDYTQAASADANDNTQAASADATGDTKGASADVNDNEQSVSADVISSLKLLMTDGANDDCNSFLLDDNSSIPFLVDEISSNLLDKSLSRVKPPAELLENSAFQFLQD 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2376 1387 CDD MyosinXI_CBD 924 1356 IPR037975 GO:0007015
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 1252 1315 - -
Glsi12g2376 1387 Gene3D - 443 623 - -
Glsi12g2376 1387 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 12 61 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 ProSiteProfiles Myosin motor domain profile. 66 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 Coils Coil 839 873 - -
Glsi12g2376 1387 Gene3D Kinesin motor domain 69 653 IPR036961 -
Glsi12g2376 1387 ProSiteProfiles Dilute domain profile. 973 1268 IPR002710 -
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 1277 1315 - -
Glsi12g2376 1387 FunFam Myosin 2 316 432 - -
Glsi12g2376 1387 Gene3D - 256 314 - -
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 902 917 - -
Glsi12g2376 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 654 IPR027417 -
Glsi12g2376 1387 SMART DIL_2 1142 1250 IPR002710 -
Glsi12g2376 1387 Pfam Myosin head (motor domain) 68 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 885 917 - -
Glsi12g2376 1387 Coils Coil 740 767 - -
Glsi12g2376 1387 Pfam DIL domain 1143 1242 IPR002710 -
Glsi12g2376 1387 Coils Coil 804 831 - -
Glsi12g2376 1387 CDD MYSc_Myo11 80 654 IPR036018 -
Glsi12g2376 1387 SMART MYSc_2a 60 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PANTHER MYOSIN 685 1244 - -
Glsi12g2376 1387 Pfam Myosin N-terminal SH3-like domain 14 56 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PRINTS Myosin heavy chain signature 96 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PRINTS Myosin heavy chain signature 433 461 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PRINTS Myosin heavy chain signature 486 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 PRINTS Myosin heavy chain signature 153 178 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi12g2376 1387 Coils Coil 670 718 - -
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 885 901 - -
Glsi12g2376 1387 FunFam Myosin heavy chain 256 311 - -
Glsi12g2376 1387 MobiDBLite consensus disorder prediction 1252 1270 - -
Glsi12g2376 1387 Gene3D Myosin VI head, motor domain, U50 subdomain 316 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2376 Glsi-ChrGlsi12 37968154 37988289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2376 566 900 Myosins gene family AT1G04600 26.302 8.73e-13 71.6