Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2362 ATGGCTAATTACTTAACCACTCTCAGCTACTTCATCTTTGTATCTCTTTCTTATTATGCTTTTGCAGCTGTAGTGTCCAAGGATGGGTGTGGAGATTACAAAAGCATCAATGAAGCCATAGCAGAAGCTCCAAGCTTCAGTGCTGAAAAATACACCATCCATGTGGTAGCTGGAATCTATGAGGAGAGTCTCATCATCCCTTTTGAGAAAACTAACATAATGCTCATCGGAGATGGAAGCCAATTCACAAGGATTACTGGGAATCGCATTGCCTCTGGATCTACCCCAATGGATCAAAGTGCCACTGCAGTGATATACGGAACAGGGTTCGTGGCGAAGAACCTTGCGTTCGTGAACACACTAGGTCCAGACGGAGGTCCAGGAGTGGCCTTGCTGAACAAGGCAGAAACCAGTGCCTTCCACAAATGCTCCTTCGAAGGCTACCAAGACACCTTATGGGCAGCTTCTGGTCGCCAATTCTACAAAGACTGCAAAATCTACGGCACAGTAGATTTCATAATGGGAGATGCCCAAGCAGTGTTTCAGAGCTGCAAACTCTACGCCAGATACAAAGACTTCGTAGCCTTCACTGCCCAATCTCGCGCTAGTGAGTACCAGCCCACTGGGTTTGTCTTTCAGTTCTGCAAGTTCACCATATCCCCTGAGGACTCGGCCAGAAGATCAATGGTCATAAGGGCTACCCTAGGCAGGCCATGGAGGGCCTATTCTAGGGTTGTTATCATGCAGTCTTATATTGATTCTTTGATAGACCCAAAAGGGTGGGAAGTCATGTACGGTTCGATTCCTACGGATAAGTTAAGTTACATAGAGTTTCGTAATGTGGGGCCAGGGTCTAGGACTGATGGGAGAGTGAAGTGGCCCGGGGTGAAGGTGGCTTATGATAAGGAGGAAGTTGAAGATTTTACTGTGTCATGGTTTCTGGATGGAGATGCTTGGATTCCTGGAACTGGGATTCCTTACCATGCAGGATTCTAA 996 0.4699 MANYLTTLSYFIFVSLSYYAFAAVVSKDGCGDYKSINEAIAEAPSFSAEKYTIHVVAGIYEESLIIPFEKTNIMLIGDGSQFTRITGNRIASGSTPMDQSATAVIYGTGFVAKNLAFVNTLGPDGGPGVALLNKAETSAFHKCSFEGYQDTLWAASGRQFYKDCKIYGTVDFIMGDAQAVFQSCKLYARYKDFVAFTAQSRASEYQPTGFVFQFCKFTISPEDSARRSMVIRATLGRPWRAYSRVVIMQSYIDSLIDPKGWEVMYGSIPTDKLSYIEFRNVGPGSRTDGRVKWPGVKVAYDKEEVEDFTVSWFLDGDAWIPGTGIPYHAGF 331
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2362 331 Pfam Pectinesterase 23 317 IPR000070 GO:0030599|GO:0042545
Glsi12g2362 331 SUPERFAMILY Pectin lyase-like 17 330 IPR011050 -
Glsi12g2362 331 PANTHER PECTINESTERASE 23 321 - -
Glsi12g2362 331 FunFam Pectinesterase 4 19 331 - -
Glsi12g2362 331 Gene3D - 21 331 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g2362 Glsi-ChrGlsi12 37883287 37885148 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2362 24 331 Carbohydrate Esterase AT3G05620 45.981 4.51e-91 280