Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2324 ATGGCAAGCGAAGCAGTTGTTGAAGGGGCTGAAACTGTCGCTGCAACGACAGAGGCGGTGGCGGCCGAGACAGGGTCCAAACACAAATTGGAAAGAAACTGGACTTTTTGGTTTGATAATCAATCAAAACCTAAACAAGGAGCTGCTTGGGGAACCTCTCTTCGCAAGGTTTACTCCTTCGATACCGTCGAGGAGTTCTGGTGCTTGTATGACCAGATATTTAAGCCCAGCAAGTTGCCTGGCAATGCGGATTTCCACCTGTTTAAGACTGGGATTGAACCAAAATGGGAAGATCCCGAATGTGCTAATGGAGGAAAGTGGACTGCCGCCTGCAGCAGAAAGACTAACCTTGATACGATGTGGCTTGAAACTTTGATGGCTTTGATTGGGGAGCAAATTGACGAGGGTGATGACATATGTGGTGTGGTTGCAAGCGTGCGCCAAAGGCAGGACAAACTTTCATTGTGGACAAAGACAGCAGCAAATGAGGCTGCCCAGATGAGCATTGGGAGGAAGTGGAAGGAGATCATTGACGTTAATGACAAGATCAATTACAGCTTTCATGATGATTCTAGAAGGGAAAGATCAGCAAAGGGCCGATACAGTGTGTAA 612 0.4739 MASEAVVEGAETVAATTEAVAAETGSKHKLERNWTFWFDNQSKPKQGAAWGTSLRKVYSFDTVEEFWCLYDQIFKPSKLPGNADFHLFKTGIEPKWEDPECANGGKWTAACSRKTNLDTMWLETLMALIGEQIDEGDDICGVVASVRQRQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKINYSFHDDSRRERSAKGRYSV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2324 203 Pfam Eukaryotic initiation factor 4E 30 184 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi12g2324 203 FunFam Eukaryotic translation initiation factor 4E 19 203 - -
Glsi12g2324 203 SUPERFAMILY eIF4e-like 14 196 IPR023398 -
Glsi12g2324 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Glsi12g2324 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Glsi12g2324 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 18 194 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2324 Glsi-ChrGlsi12 37578122 37595779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2324 11 195 Eukaryotic Initiation Factors Gene Family AT5G35620 65.789 8.28e-86 250