Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2302 ATGGCGTCTGACCCATGGGTGCGACAATTTAATGAAGCATCAAAGCTAGCAGAAGAAGTCAAGGGAATGATGTCTGCTAAAAGTTCCCTGCCCCCTTCTGGACCCGAAACACAGCGTCATTTGTCAGCAGCCCGGAGAAAGATAACTATACTGAGGACCAAACTTGAAATTCTGCAGTCACTTCTCACAGCGGTTCCCAGCAAGCAACAAATAACAGGAAAAGAAATGAATCGACGCCAAGACTTGCTGGCAAATATAAGTTCCAAAGCTAACCAGATGGCTACTACCCTTAACATGTCCGGTTTAACTAACAGAGATAGCTTGTTAGGCCCTGATAAAAAGTCTGAAGATGTCATGAACAAGGCAGCTGGCTTGGACAACCAAGGTCTTGTTGGTTTTCAACGACAAATTATTAAAGAACAAGATGAAGATCTCGAAAAACTAGAAGAGACAGTTACAAGCACCAAACACATTGCATCGGCAGTTAATGAGGAACTTAACCTACATACTAGGCTTCTGGATAATTTAGATGAGCATGTGGATACAACAAATTCCCGCCTACTGATGGTACAGAGGAGATTGGCTGCATTGAACAAGCGCACTAAAGGTGGTTGCTCTTGCATGATCCTGTTAGTCCTTGTCATCATCATTCTGATAATTGTTGCATGGGCATTGATTAAGTATTTGTAG 690 0.4275 MASDPWVRQFNEASKLAEEVKGMMSAKSSLPPSGPETQRHLSAARRKITILRTKLEILQSLLTAVPSKQQITGKEMNRRQDLLANISSKANQMATTLNMSGLTNRDSLLGPDKKSEDVMNKAAGLDNQGLVGFQRQIIKEQDEDLEKLEETVTSTKHIASAVNEELNLHTRLLDNLDEHVDTTNSRLLMVQRRLAALNKRTKGGCSCMILLVLVIIILIIVAWALIKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2302 229 PANTHER SYNTAXIN 22 217 IPR045242 -
Glsi12g2302 229 Gene3D - 137 199 - -
Glsi12g2302 229 CDD SNARE_Qc 138 195 - -
Glsi12g2302 229 SMART tSNARE_6 130 197 IPR000727 -
Glsi12g2302 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Glsi12g2302 229 Coils Coil 138 158 - -
Glsi12g2302 229 Pfam SNARE domain 172 221 IPR000727 -
Glsi12g2302 229 SUPERFAMILY SNARE fusion complex 126 196 - -
Glsi12g2302 229 FunFam syntaxin-51 isoform X2 137 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2302 Glsi-ChrGlsi12 37403863 37406668 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2302 2 229 SNARE and Associated Proteins AT1G79590 59.130 1.50e-96 281