Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2295 ATGGCTTTTTCCAAAACTTCGGTTGCCTTGAGCATCATACTTGTTCTTTCTCTTGCTTTTGCTTTTCAATGTTGTGCTGATAGCAACCAGACATCTACGTTAGTTGTAGATGCTGCATCTGGGAGGCCAATTCCCCAATATTTTTTGGGAGTATTTTTTGAGGAGATTAATCATGCTGGCGCTGGAGGATTGTGGGCAGAGCTTGTGAGCAACAGAGGTTTTGAATCCGGGGGCCAAATGGTTCCCTCAAACATCGACCCTTGGTCAGTTATTGGTGATGAATCAACCATAATTGTCTCAACCGATCTTTCCTCATGCTTTCCCCGGAACCAGGTTGCACTTCGAATGGATGTGCTTTGTTCCTCTCCCCAGGTTTGCCCAGCAGGCGTTGGTGTCTCTAACCCTGGTTTTTGGGGCATGAATATTGAGAGAGGGAAGAAATACAAAGTGGTCTTTTATGTTCGTGCAATCGGACCCATTGATCTTAAAGTTTCGTTTACGGGATCAAACGATGGACAAGAACTGGCTTCAACTAACATCAGGGCTTTTGGTTTGCAAGTTGTAAAGTGGACAAAGATGGAGACTATACTTGAGGCCAAGGCATCAAATTTTAACTCAAGCCTTCAAATAACAACAACCAGGCGAGGGGTGATATGGTTGGACCAAGTCTCAGCTATGCCCATGGACACCTACAAGGGACATGGTTTCCGGACCGACCTTTATCAAATGGTAGCAGATTTGAAACCAAAATTTCTTAGATTTCCCGGTGGTTGTTACGTTGAAGGAGACTATCTGAGAAATGCATTTAGGTGGAAAGATACCGTTGGACCATGGGAGAAGAGACCTGGCCACTTCAATGATATGTGGGGTTATTGGACTGATGATGGATTTGGTTATTTAGAGTTTCTTCAGCTAGCAGAGGACCTTAATACAATGCCAATATGGGTGTTTAATAATGGTATCAGTCATCATGATGAAGTTGATACGTCCGATATCGCGCCATTCGTGCAGGAAGCTCTTGATGGCATTGAATTTGCAAGAGGTTCTCCTACCTCAAGGTGGGGTAAGATTAGAGCTGCTTTGGGACACCCTCAGCCCTTTGACCTTCGATACGTTGCCATTGGTAATGAGGATTGCGGCAAGGAAAACTACCAAGGGAACTACCTCAAGTTCTACGATGCTATAAAACGTTCCTACCCAGATATGCAAATAATCTCAAATTGCGATGCTACTGCTAAACCCTTAGAACACCCTGCTGATTTGTATGATTTTCATATTTATACGAACGCCAAGGACATCTACTCTAAGCAGAACAAGTTCGATTCCGTTCCACGTAATGGTGCAAAGGCTTTTGTTAGTGAGTATGCTGTTTGGAAAGAAGATGCTGGAAATGGAACCTTGTTATCAGCCTTGGGCGAAGCCGCATTCCTTATGGGATTAGAAAAGAATAGTGATATTGTTGAAATGGTTAGCTATGCACCGCTTTTTGTTAATACAAATGATAGAAGGTGGATGCCAGATGCAATTGTTTTTGACTCTCATCAGAACTATGGAACTCCAAGCTATTGGTTGCAGCAACTTTTTTCAGAGTCCAGCGGAGCAACATTCCTTAATTCAACACTTCAAGCTTCTTCTCCGTCTGTTTTTGCATCTGCTATTGTTTGGCAAAACCCAGCCGATACGAAAAGTTACCTGAGGATTAAGGTTGTAAACTTCGACGACAATCCTGCGAACCTTCAAATTACTATAAATGGTTTTGATTCAAAGGATCTGTCTGGTTCTACAAAGACTGTCCTCACATCAGGCAACGTAATGGACGAGAATTCTTTCGCAGAACCAAAGAAGGTGGTACCACAAACAAGTCTACTAGAGAATGCTGCCGAGGATATGACTGTCACACTCCCTCCCAATTCAGTCACATCTTTTGAATTGCCAAAATGA 1941 0.4312 MAFSKTSVALSIILVLSLAFAFQCCADSNQTSTLVVDAASGRPIPQYFLGVFFEEINHAGAGGLWAELVSNRGFESGGQMVPSNIDPWSVIGDESTIIVSTDLSSCFPRNQVALRMDVLCSSPQVCPAGVGVSNPGFWGMNIERGKKYKVVFYVRAIGPIDLKVSFTGSNDGQELASTNIRAFGLQVVKWTKMETILEAKASNFNSSLQITTTRRGVIWLDQVSAMPMDTYKGHGFRTDLYQMVADLKPKFLRFPGGCYVEGDYLRNAFRWKDTVGPWEKRPGHFNDMWGYWTDDGFGYLEFLQLAEDLNTMPIWVFNNGISHHDEVDTSDIAPFVQEALDGIEFARGSPTSRWGKIRAALGHPQPFDLRYVAIGNEDCGKENYQGNYLKFYDAIKRSYPDMQIISNCDATAKPLEHPADLYDFHIYTNAKDIYSKQNKFDSVPRNGAKAFVSEYAVWKEDAGNGTLLSALGEAAFLMGLEKNSDIVEMVSYAPLFVNTNDRRWMPDAIVFDSHQNYGTPSYWLQQLFSESSGATFLNSTLQASSPSVFASAIVWQNPADTKSYLRIKVVNFDDNPANLQITINGFDSKDLSGSTKTVLTSGNVMDENSFAEPKKVVPQTSLLENAAEDMTVTLPPNSVTSFELPK 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2295 646 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 644 - -
Glsi12g2295 646 Gene3D - 529 644 IPR013780 -
Glsi12g2295 646 Gene3D Glycosidases 221 528 - -
Glsi12g2295 646 SMART alpha_l_af_c 453 638 IPR010720 GO:0046373|GO:0046556
Glsi12g2295 646 SUPERFAMILY Glycosyl hydrolase domain 546 644 - -
Glsi12g2295 646 SUPERFAMILY (Trans)glycosidases 206 536 IPR017853 -
Glsi12g2295 646 FunFam Alpha-L-arabinofuranosidase 1 529 645 - -
Glsi12g2295 646 Gene3D - 65 220 - -
Glsi12g2295 646 Pfam Alpha-L-arabinofuranosidase C-terminal domain 454 638 IPR010720 GO:0046373|GO:0046556
Glsi12g2295 646 FunFam Alpha-L-arabinofuranosidase 1 223 529 - -
Glsi12g2295 646 FunFam Putative alpha-L-arabinofuranosidase family protein 65 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2295 Glsi-ChrGlsi12 37341953 37345304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2295 27 646 Glycoside Hydrolase AT3G10740 65.545 0.0 871