Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2292 ATGGGACGAGCTCGGCTGCTTGTTTCCGATTTTGTCGTGTCTTTCATGTGGGTATGGTCAGGGGTTCTGATTAAGATTTTTGTCTCCAGATATTTGGGGTTGGGTCACGATCCCCTTCTTGAGACGGTGAAGGCTACACTCTCCGTTATGAACATGTTCTTCTTTGCATTTTTGGGAAAATTAACCCGTGGTGGCGCCTACAATCCTCTCACCGTTTTGGCTGACGCCATTTCTGGGGATTTCGGCAACTTCCTTTATTGCGTTGGTGCTAGAATTCCCGCTCAGGTAATTGGATCTATTACTGGGGTAAGGCTTATAATACAGACTCTTCCTGAAGTAGGACGGGGACCGCAATTGAACATTGACATTCATCGAGGTGCACTGACTGAAGGATTCCTAGCATTTGTAATAGTTACCATCTCACTTGGGCTTGCCACAAAACTTCCTGGAAGTTTCTTTATGAAGACTTGGATTTCCAGCATTTCCAAGCTAACACTTCATATACTTGGCTCTGATCTAACTGGTGGTGTTATGAACCCAGCCTCTGTACTGGGATGGGCTTATGCTCGAGGGGATCACATTACAAAGGAGCACATCCTTGTATACTGGCTTGCCCCCATAGAGGCAACTCTACTTGCAGTGTGGATATTCAAATTGGTAGTTCAGCCTGCAAAAGATGACAAAACAGGCACAAAAAGTAAATCGGATTGA 711 0.4529 MGRARLLVSDFVVSFMWVWSGVLIKIFVSRYLGLGHDPLLETVKATLSVMNMFFFAFLGKLTRGGAYNPLTVLADAISGDFGNFLYCVGARIPAQVIGSITGVRLIIQTLPEVGRGPQLNIDIHRGALTEGFLAFVIVTISLGLATKLPGSFFMKTWISSISKLTLHILGSDLTGGVMNPASVLGWAYARGDHITKEHILVYWLAPIEATLLAVWIFKLVVQPAKDDKTGTKSKSD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2292 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2292 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2292 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2292 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2292 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Glsi12g2292 236 SUPERFAMILY Aquaporin-like 4 226 IPR023271 -
Glsi12g2292 236 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Glsi12g2292 236 Pfam Major intrinsic protein 5 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2292 Glsi-ChrGlsi12 37317445 37319768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2292 1 236 Major Intrinsic Protein MIP AT3G56950 59.494 3.98e-104 300