Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2271 ATGAGGACCCTGTTCACCGGAAAATCTTCGTACATGGCCTCGGATGGGACACAAACGCGGAGAACCTCATTAACTCTTTCAAGCAGGGCGGAGAAATTGAAGATTGTAAGGCTGTATGTGATAAGATATCAGGGAAATCCAAGGGGTTTCATCCTTTTCAAGACGCGTCGTGGGGCTCGCAAAGCGCTGAGGCAACCACAGAAGAAGATTGGTAACCGAATGACTGCCTGCCAACTGGCGTCGGCTGGCCCGAGTCAACAGCCAACTGCAGCACAACCAGCTCCGGCACTACCTGTATCCGAGTATGCCCAAAGAAAGATCTTCGTGAGCAATGTTGGGGACGATTTGGATCCTCAGAAGTTGATAATGTTCTTCTCGAAGTATGGAGAGATAGAGGAAGGACCACTGGGACTTGATAAGGCATTGACAGCACTGCTTGCAACTCAGGGTGCTGGCTTGGGATGGAATAATTTGTTGGGAAGCCTAGGATCAACTGCTGGGGTAAGCCCAGGAGTTCCTGCTGCTGGTCATGGAGTACAAGGTGGTTACAGTAATCAAGCTAATATAAGGCCGGCTGTTATTGGAGGGTACGGAAGTCAAGTTGGATTGCAGGAGGCATATCCAAATCAGCAGATCAAGCAAACTAGCTCTGGTAGAGGGCAGCATGGTGTTGGGCAATATTCTGGCGCTGCCCCTTACATGGGCCACTAG 711 0.5035 MRTLFTGKSSYMASDGTQTRRTSLTLSSRAEKLKIVRLYVIRYQGNPRGFILFKTRRGARKALRQPQKKIGNRMTACQLASAGPSQQPTAAQPAPALPVSEYAQRKIFVSNVGDDLDPQKLIMFFSKYGEIEEGPLGLDKALTALLATQGAGLGWNNLLGSLGSTAGVSPGVPAAGHGVQGGYSNQANIRPAVIGGYGSQVGLQEAYPNQQIKQTSSGRGQHGVGQYSGAAPYMGH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2271 236 SUPERFAMILY RNA-binding domain, RBD 35 139 IPR035979 GO:0003676
Glsi12g2271 236 Gene3D - 47 93 IPR012677 -
Glsi12g2271 236 Gene3D - 94 133 IPR012677 -
Glsi12g2271 236 MobiDBLite consensus disorder prediction 214 236 - -
Glsi12g2271 236 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 48 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2271 Glsi-ChrGlsi12 37181594 37182624 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2271 49 84 C2H2 Transcription Factor Family AT2G19380 55.556 5.35e-09 54.3