Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2248 ATGTTCTTCAGTGCCATATGTGTAACATATCTGCTGTATCAATTGCAGATCCTTGTTATGAGCTCTTTGCAAACTGCTTTGCCAGATGTCCAGTTGCCACCCAATTCCATCACGATATCCCTAGCTATGAGGAATATAGGCTATTGTGTTGTATTGGCCACAGATGGATTCCTTAACGATGTTGAAATGAATATGATAGTTGTCCGCTCGGTGCTAGTGACTGAATTTCCCCATCGAGCAACATCATATTTGCCCAGAATTGAAGTTGAAAAAGAAACTTGTCCTTTCCAGGCTCCCCCGGCAGTATCTCTGCTCTGGTACTCTGGATCTCGATTCTTGCTTGTCTATAATAATAAAGTTAATATGAAGCGTCCCTGCAGGTTGATACAAGCTTTGTTAGCCGTTTGGCTTGTGCTCTCACTGCCAGTTAATCCAAACCCATTATCAGCTGCTTCAACTGACTGTCATTTTCCAGCAATCTTCAACTTTGGGGACTCAAATTCTGACACCGGTGGCCTCTCTGCTGCCTTCGGACAAGCTGGTCCTCCCCACGGAGAGTCCTACTTCCACCACCCTGCTGGACGCTACTGTGATGGCCGTCTCGTCATTGATTTTATAGCTGAGAAGCTGGGGGTACCATATTTGAGTGCTTACCTTGATGCGGTTGGCTCAAATTTCACACATGGAGCCAATTTCGCCACGGCTGGATCCACAATAAGACCTCAGAATACAACCCTTCATCAGGTTGGTGGTTTCAGTCCTTTCTCTTTGGATGTTCAGTTCAACCAATTCAATGATTTCCAGCGCAGATCTCAACTATTTCGCAACAAAGGAAGAGTATATAAAACACTGTTGCCAAAGGCACAAGACTTCTCTCGTGCATTATACACATTCGATATTGGGCAGAATGACTTGGCAGCTGGTTACTTCAAAAATATGTCCACAGATCAAGTCAGAGCATATGTTCCTGATGTTTTAGCCCAGTTCAAGAACATTATTAAGTATGTATATGATCATGGAGGCAGGTCATTCTGGATACATAACACGGGTCCTGTTGGTTGTTTGCCATACATAATGGATCTTCCACTGGTTAAAGTAGCTGAGGTGGATAAAGTGGGATGTGCGATCCCTTACAATGAAGTGGCTCGATTCTTTAATCGTCGATTAAAAGCAGCTGTGGTTCAACTTAGAAGGAAACTTCCCTTGGCTGCCATCACCTATGTTGATGTGTACTCCGTGAAGTACTCCCTCATTAGTCAAGCTAAGAAGCATGGTTTTGAGGAACCATTGAGAGCTTGCTGTGGGCATGGCGGGAGGTACAACTACAATATGCACATTGGATGCGGAGCAAAGGTAAAGATTCATGGTAAAGAGGTCTTGGTGGGGAAACCATGCAAGGATCCATCGGTTAGGATTAGCTGGGATGGTGTGCACTACACTCAGGCTGCTAATAAATGGTTATTTGAACAAATTGTAGATGGATCATTTTCGGATCCACCAATTCCATTGAATATGGCATGTCGTAGGTACCACAACTGA 1539 0.4418 MFFSAICVTYLLYQLQILVMSSLQTALPDVQLPPNSITISLAMRNIGYCVVLATDGFLNDVEMNMIVVRSVLVTEFPHRATSYLPRIEVEKETCPFQAPPAVSLLWYSGSRFLLVYNNKVNMKRPCRLIQALLAVWLVLSLPVNPNPLSAASTDCHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGESYFHHPAGRYCDGRLVIDFIAEKLGVPYLSAYLDAVGSNFTHGANFATAGSTIRPQNTTLHQVGGFSPFSLDVQFNQFNDFQRRSQLFRNKGRVYKTLLPKAQDFSRALYTFDIGQNDLAAGYFKNMSTDQVRAYVPDVLAQFKNIIKYVYDHGGRSFWIHNTGPVGCLPYIMDLPLVKVAEVDKVGCAIPYNEVARFFNRRLKAAVVQLRRKLPLAAITYVDVYSVKYSLISQAKKHGFEEPLRACCGHGGRYNYNMHIGCGAKVKIHGKEVLVGKPCKDPSVRISWDGVHYTQAANKWLFEQIVDGSFSDPPIPLNMACRRYHN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2248 512 FunFam GDSL esterase/lipase At1g09390 148 496 - -
Glsi12g2248 512 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 131 500 - -
Glsi12g2248 512 CDD SGNH_plant_lipase_like 158 495 IPR035669 -
Glsi12g2248 512 Pfam GDSL-like Lipase/Acylhydrolase 160 491 IPR001087 GO:0016788
Glsi12g2248 512 Gene3D SGNH hydrolase 148 494 IPR036514 -
Glsi12g2248 512 SUPERFAMILY SGNH hydrolase 160 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2248 Glsi-ChrGlsi12 36967293 36972774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2248 158 505 Acyl Lipid Metabolism Gene Families AT4G10950 29.167 1.91e-33 129