Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2234 ATGAATATATCAATATTCTTCATCTACTTCTTTGTGCTTCCCTTTGCATTTGGCGACCTAAGGGTTGGATTCTATAGCTCTAGCTGCCCGGCAGCAGAGACCATCGTGCGCCAAGTTGTGCAGAGGCGTTTCAACCTGGATAAATCCATTACCGCAGGCTTGCTTCGCATGCACTTCCATGATTGTTTTGTTGGAGGTTGTGACGCTTCCATACTAATAGATCCAACCAAGAGAAAGTCATCGGAGAAACAGGCGGGACCCAACCTCACCGTTCGGGGATTTGAGCTCATAGATGAGATCAAGACAAACTTAGAAAAAGCTTGCCCTTCCACAGTTTCATGTGCAGATATCGTAACACTGGCCACCCGAGATTCAGTGGCTATGGTAGGAGGACCCAGATACGACGTCCCCACTGGGCGGCGAGATGGGCTGGTATCAGATCCCAATCAAGTGAATCTGCCTGGACCATCATTTTCAGTGCCTCAGGCACTCCAATCTTTCACCGATAAGGGTTTGACATTGAATGAAATGGTGACCCTTTTGGGAGCACACACGGTGGGTTTTGCTCACTGCAGTTTCTTCCAAGATAGGCTCTCCAGCTTCCAAGGAAGCGTTGATCCAACAATAGATCCTGCCTTGGATGCCAAGCTGGTGAGGACATGTGGGTCGGCATCTAGGCCAGCAAGGAACGATCCCAGAGTGTTTTTGGACCAAAACACATCCTTTGTTTTCGATAACCAATTCTACAACCAGATCCTTGGGAAGAGAGGCGTACTCCACATTGACCAGCAATTGGCCTTGGATCCATCATCAAGACCCACTGTTTCAGGTTTTGCTGCAAATGGGGCTAGCTTTCAGCAAAGTTTTGCACTAGCTATGGTAAAGATGGGAAGCATTGATGTTTTGGTTGGAAATGCCGGACAGATTAGGAAAAATTGCAGAGCTTTTAATAATCCTTAG 960 0.474 MNISIFFIYFFVLPFAFGDLRVGFYSSSCPAAETIVRQVVQRRFNLDKSITAGLLRMHFHDCFVGGCDASILIDPTKRKSSEKQAGPNLTVRGFELIDEIKTNLEKACPSTVSCADIVTLATRDSVAMVGGPRYDVPTGRRDGLVSDPNQVNLPGPSFSVPQALQSFTDKGLTLNEMVTLLGAHTVGFAHCSFFQDRLSSFQGSVDPTIDPALDAKLVRTCGSASRPARNDPRVFLDQNTSFVFDNQFYNQILGKRGVLHIDQQLALDPSSRPTVSGFAANGASFQQSFALAMVKMGSIDVLVGNAGQIRKNCRAFNNP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2234 319 Pfam Peroxidase 36 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 Gene3D Peroxidase, domain 2 154 296 - -
Glsi12g2234 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Glsi12g2234 319 SUPERFAMILY Heme-dependent peroxidases 19 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 FunFam Peroxidase 154 296 - -
Glsi12g2234 319 ProSiteProfiles Plant heme peroxidase family profile. 19 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 Gene3D - 23 317 - -
Glsi12g2234 319 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Glsi12g2234 319 PANTHER PEROXIDASE 25-RELATED 12 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2234 319 FunFam Peroxidase 23 160 - -
Glsi12g2234 319 CDD secretory_peroxidase 20 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2234 Glsi-ChrGlsi12 36911596 36912638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2234 4 318 Peroxidase AT4G26010 57.911 5.51e-130 372