Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2233 ATGAAGATCTCAATCCTGCCGCTTTTGTTCTTTTTGTTCGAAATTCCCACCGCATTTGCTGATCTCCAGGTTGGTTTTTATGGCTCTACCTGTCCTAAAGCAGAGACCATTATACAGCAAGTGGTGCAGAAGCAATTCAGCAGCGACAGGTCCTTAACTGCAGCCTTGGTTCGCTTGCACTTCCATGACTGTTTTGTTAGCGGATGTGATGCCTCATTACTTATAGACCCCATAGATGAAAATGGATCAGAGAAAAATGCGAGTGATAGCTTATTCCTTCGAGGATTTAAAGAAATTGATGAGATAAAAGAAAGCGTGGAAGCTGCATGCCCTTCTACAGTTTCATGTGCTGATATCATAGCGCTTGCTACAAGAGATGCTGTGGCTCTGGCGGGAGGACCCAAATATCAAGTTCCCACAGGGAGGCGTGATGGCCTAGTTTCAAATCTTAGTGATGTAAACTTACCACAGCCTGATTTTGCTGTGGATGAGGCTCTGGAATTTTTCACTGCAAGGAACTTAACAGCAACTGATATGGTTACCCTTTTGGGTGCCCATACGGTTGGTGTTGCCCATTGTGGTTTCTTTGTGGATAGGGTTCGAGGACCTAATAATGAATCTGACGCTACTCTGGATCCTGCATTGAAAGCTAAGCTGGATAAGTTATGTTCTTCGGATTCTGAAGCCACTGCATTTTTGGATCAAAACACGTCGTTTGTTTTTGACAACCAATTCTACAACCAAATTCTTCAGAAAAGAGGTGTATTACAACTGGATCAACAACTTGCCTTGGACAATTCCACCAAAACTATTGTTTCCCAATTTGCAATAGACAATGTGGGGTTTGAGGAGCGTTTTGCAAATGCTATAATAAAGATGGGTCTCGTCCAAGTTCTGGTGGGAAAGGATGGAGAGATTCGGAAAAATTGTAGGGTTTTTAATAATAAACCCAATTAG 957 0.4253 MKISILPLLFFLFEIPTAFADLQVGFYGSTCPKAETIIQQVVQKQFSSDRSLTAALVRLHFHDCFVSGCDASLLIDPIDENGSEKNASDSLFLRGFKEIDEIKESVEAACPSTVSCADIIALATRDAVALAGGPKYQVPTGRRDGLVSNLSDVNLPQPDFAVDEALEFFTARNLTATDMVTLLGAHTVGVAHCGFFVDRVRGPNNESDATLDPALKAKLDKLCSSDSEATAFLDQNTSFVFDNQFYNQILQKRGVLQLDQQLALDNSTKTIVSQFAIDNVGFEERFANAIIKMGLVQVLVGKDGEIRKNCRVFNNKPN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2233 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Glsi12g2233 318 Gene3D - 25 314 - -
Glsi12g2233 318 ProSiteProfiles Plant heme peroxidase family profile. 21 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Glsi12g2233 318 Gene3D Peroxidase, domain 2 156 293 - -
Glsi12g2233 318 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 FunFam Peroxidase 25 167 - -
Glsi12g2233 318 Pfam Peroxidase 39 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 CDD secretory_peroxidase 22 313 IPR033905 GO:0004601|GO:0042744
Glsi12g2233 318 SUPERFAMILY Heme-dependent peroxidases 21 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 PANTHER - 6 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2233 318 FunFam Peroxidase 156 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2233 Glsi-ChrGlsi12 36907917 36908972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2233 4 315 Peroxidase AT4G26010 54.459 1.35e-124 358