Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2232 ATGAAGATCTCAATTGTGCTCTGCTTCGTTGTAGCGCGTCTGGTTCCCTTTGCATTGGGTGAGCTGAAGGTTGGATTCTATGGCTCTTCATGCCCGCGAGCAGAGTCCATTGTGAAGCAAGTGGTGCAGGAGCGATTCAACCGCGACAAGTCCATAACTGCAGCCTTGCTTCGCATGCATTTTCATGACTGTTTTGTCAGAGGTTGTGATGCATCCATACTTATAGACTCCACTGGGAATAACGAGGCAGAGAAAAACGCAGGCCAAAATGCGAGCGTTCGAGGATATGATCTGATCGATGATGTGAAGGAAAGGCTTGAAGATGCATGCCCTTCCACAGTGTCCTGTGCTGATATCATAACAATGGCCACCAGAGATGCTGTGGCTTTATCTGGAGGACCCAAATATGAGGTTCCCACAGGCAGACGTGATGGCCTAATCTCTAATATAAATGAAGTTGATTTGCCAGGACCAGGGATCGCTGTGCCCGCGGCCTCGGAATTCTTTGCTAGAAAGGGAATAACAAAAGAAGAAATGGTGACGCTTCTGGGTGCACATACAGTTGGTGTTGCAGCTGGCTCATTTTTGGACAAAAAGACACCCTTTACAGTTGATAACGAGTTCTACAAGCAGATTCTTCTCAAGAGAGCCATACTGTCCCTTGATCAAAACCTTGCCATAGATACGTCTACAAGGGGTTTTGTCACTAGTTTTGCATCCAGCAATGACAAATTTGAAAAGAGCTTCGCCAGTGCTATGATAAAGATGGGAAAGATTGAAGTTCTCGTCGGCAAAGCTGGAGAGATTCGCAAGAATTGCAGCTCTTTTAATGAACACAACTAG 843 0.4614 MKISIVLCFVVARLVPFALGELKVGFYGSSCPRAESIVKQVVQERFNRDKSITAALLRMHFHDCFVRGCDASILIDSTGNNEAEKNAGQNASVRGYDLIDDVKERLEDACPSTVSCADIITMATRDAVALSGGPKYEVPTGRRDGLISNINEVDLPGPGIAVPAASEFFARKGITKEEMVTLLGAHTVGVAAGSFLDKKTPFTVDNEFYKQILLKRAILSLDQNLAIDTSTRGFVTSFASSNDKFEKSFASAMIKMGKIEVLVGKAGEIRKNCSSFNEHN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2232 280 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Glsi12g2232 280 CDD secretory_peroxidase 21 276 IPR033905 GO:0004601|GO:0042744
Glsi12g2232 280 ProSiteProfiles Plant heme peroxidase family profile. 21 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Glsi12g2232 280 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 Gene3D Peroxidase, domain 2 196 256 - -
Glsi12g2232 280 Pfam Peroxidase 38 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 Gene3D - 26 155 - -
Glsi12g2232 280 FunFam Peroxidase 25 167 - -
Glsi12g2232 280 PANTHER - 195 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 SUPERFAMILY Heme-dependent peroxidases 21 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 Gene3D Peroxidase, domain 2 156 195 - -
Glsi12g2232 280 Gene3D - 257 277 - -
Glsi12g2232 280 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g2232 280 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2232 Glsi-ChrGlsi12 36903402 36904327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2232 1 277 Peroxidase AT4G26010 54.045 2.92e-114 330