Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2227 ATGGGCATCAAAATTTTCATGGTTTCCTTCATGCTAACCTCAGTATTGTTCTTTTGTCTCTATATTCCCACCAGATTAACCATACCCATTTCCAGCTTCAAGCCTGTTATGAAATACTTCAATATCCCAAAAACTAGCAAAGCGTACCCTATAACTTTTGCTTACCTAATCTCTGCATCCAAAGGGGATGCCGGAAAGCTCAAAAGATTGCTGCAGGCGCTGTATCATCCGGGAAATTACTATCTGATTCATATGGATTATGGGGCACCCGAAGCAGAGCACAGGGATGTGGTTGACTTTGTGGCAAGAAACCCAGTTTTTGGTCAAGTGGGGAATGTTTGGGTTGTGGGGAATCGTAATTTGGTCACCTATAGAGGACCAACGATGCTTGCTACTACTCTCCATGCTATGGCTATGCTTCTACGGACTTGCCAATGGGATTGGTTTATTAATCTTAGTGCCTCTGATTATCCCTTAGTCACACAAGATGATCTGATCCAAGCATTTTCTGAGTTGCCAAGAGATATCAATTTCGTACAGCATAGCAGTCACCTGGGCTGGAAACTGAATAAGAGAGGAAAGCCAATAATTATAGACCCAGGGCTTTACAGCCTCAATAAATCAGAGATTTGGTGGGTCATTAAGCAGAGGAGTTTGCCAACATCCTTTAAACTCTATACAGGCTCAGCTTGGACAATATTATCAAGATCTTTCGCCGAATATTGCATTGCGGGGTGGGATAATTTGCCAAGGACCCTGCTCCTCTACTACTCTAACTTTGTGTCATCGCCTGAAGGATATTTCCAGACTGCAATATGCAATTCTGAAGACTACAAGAACACCACTGCTAACCATGACCTTCACTACATCAGTTGGGATTTTCCACCAAAGCAACACCCAAGGTCTCTTGCTCTTAAAGATTATCGGAAAATGGTTCTGAGCAGCCGTCCATTTGCCCGCAAATTCAAGAAAAATGATCCCGTTCTGGATAAAATTGATAGAGAGCTTCTCAAGAGGCATCCTGGGCAGTTTTCTTTTGGAGGATGGTGTGCTCGGGGTGGAAAAAACACAGCGTGCTCAGGTTTCGCAAGTGAGAATTTTGGTGTTCTTAGCCCTGGCCCTGCCTCTAGGAGGTTAAGAAATTTGCTAACCAAGATTCTCTCTCATAGATTTTTCCACAAACAGCAATGTAGGTGA 1197 0.4336 MGIKIFMVSFMLTSVLFFCLYIPTRLTIPISSFKPVMKYFNIPKTSKAYPITFAYLISASKGDAGKLKRLLQALYHPGNYYLIHMDYGAPEAEHRDVVDFVARNPVFGQVGNVWVVGNRNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLIQAFSELPRDINFVQHSSHLGWKLNKRGKPIIIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIAGWDNLPRTLLLYYSNFVSSPEGYFQTAICNSEDYKNTTANHDLHYISWDFPPKQHPRSLALKDYRKMVLSSRPFARKFKKNDPVLDKIDRELLKRHPGQFSFGGWCARGGKNTACSGFASENFGVLSPGPASRRLRNLLTKILSHRFFHKQQCR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2227 398 Pfam Core-2/I-Branching enzyme 53 311 IPR003406 GO:0016020|GO:0016757
Glsi12g2227 398 PANTHER GLYCOSYLTRANSFERASE 8 397 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2227 Glsi-ChrGlsi12 36863434 36866183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2227 53 398 Glycosyltransferase AT4G27480 57.061 1.07e-148 426