Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2223 ATGGCTACCTCTGTTTCTCTGTCTAAACGATTGTTCTTGAATACTTCGTTTCTCCTGCTCGTATGTGTTTGTATTATTATTCATTTCCACTCTTCACAATTTCCTGTTCTGAGCTACCGCGGCAGTCAGCAGGATTGCAAGAGCTTCCAGAGCCTAGATGACTACAAGGCCAAGTGCTTGTACCTTAAATCCAACGACTCGTGCGTCTCTCAGGGCTATATTGACTACCTTTACCTTTTTTATTGCGAATTTGGGCGATTCCCTTGGTTGGGTCACAGTCTTCTGTTTCTTTGGCTCCTGGTCCTGTTTTATCTGATGGCTAATACAGCTTCGGAATATTTTTGTCCTTCACTTGAAAACCTGTCAAAATTACTGAAGCTGTCTCCTACAATTGCTGGAGTGACACTGCTTTCTCTAGGCAATGGTGCCAATGACGTTTTCGCCTGCCTTGTCTCTTTCAAGGGTAGTGGGACAAGCGGCATTGGCTTTAATACAGTAATTGGGGGTGCTTCCTTTGTGTCCTGCGTTGTGGTCGGAACACTATGCATCTCAATTCGCCACAGGAGGATTCAAGTCAGAAAGTTTGACTTTATAAGAGATGTTTCTTTTCTTCTTTTGGTTTTTCTGTGCTTGCTTGCGATATTGATCACCGGTGAGATCAATGTTCTTGGAGCAATGGGTTTTTTTCTGATGTATATCGTGTATGTAATTGTTGTTTATGTCTCGTCTACCCGCTGGAAGGGTGTTTGTGGAGATACTGGAAGGGATGATAATTCAAGTTATGGCAGTGACTTGAGTGTGCCTTTTCTCGTTGACATGGAAAAAGGTTCGTGTGATTGTATTGAAGAAGGTGCTAAAGAATCTGGTAAAATCAAGAAGAAATGCTGCTGTATGAGATCATCGCTATGTCGAAAGTCACTTTGGGTCCTGGAGATGCCCCTTTACTTGCCCAGGAGATTGACAATTCCTGTTGTTTGCGAAGAGAGATGGTCTAAGCTGTATGCAATTTCTTCAGTGATACTAGCACCGCTTCTCATATCTGCCTTGTGTATCCCTAACAAGGAAAACGGGTCCTTCAACACACGCCTGATAACTTGCGGAGTTGGATTCTCGATTGGCGTGATATTAGGGGTAACTGCATTTTTCACAATAAAGCCATCAAGGCCACCAAAGAAATACCTGTTTCCTTGGCTTGCAGGAGGGTTTGTAATGAGTATTACATGGAGTTACATTTCAGCTCAGGAGTTGGTGGGATTGCTGGTTTCCCTTGGCCACATATGTGGAGTAAGTCCTTCAATACTGGGGCTCACAGTTCTTGCCTGGGGAAATTCTATTGGGGATTTGATGACAAATTTAACAATGGCTTCGAATGGTGGAGCAGAAGGTGCTCAAGTAGCGATATCAGGTTGTTATGCTGGCCCCATCTTCAATACTCTCGTTGGCTTGGGGTTGTCTCTTGTAAGCTCTACTTGGTCGAAGTACCCATCATCTGTTGTGATCCCTAGAGACCCATATCTCTTGGAGACATTGGCCTTTTTGGTGGTTGGATTGGTTTGGGCACTTGTGATTTTGACAAGAAGAGAGATGAGGCTTGATGGAGTCTTAGGAGGAGGGCTACTAGTTATTTACTTCATTTCTCTGTTTCTGAGGTTGATTCAGACGCTTGGATCTATTCAACTTCATGATATGTTAGTCTTACTCTTTAAAAGATGA 1713 0.4337 MATSVSLSKRLFLNTSFLLLVCVCIIIHFHSSQFPVLSYRGSQQDCKSFQSLDDYKAKCLYLKSNDSCVSQGYIDYLYLFYCEFGRFPWLGHSLLFLWLLVLFYLMANTASEYFCPSLENLSKLLKLSPTIAGVTLLSLGNGANDVFACLVSFKGSGTSGIGFNTVIGGASFVSCVVVGTLCISIRHRRIQVRKFDFIRDVSFLLLVFLCLLAILITGEINVLGAMGFFLMYIVYVIVVYVSSTRWKGVCGDTGRDDNSSYGSDLSVPFLVDMEKGSCDCIEEGAKESGKIKKKCCCMRSSLCRKSLWVLEMPLYLPRRLTIPVVCEERWSKLYAISSVILAPLLISALCIPNKENGSFNTRLITCGVGFSIGVILGVTAFFTIKPSRPPKKYLFPWLAGGFVMSITWSYISAQELVGLLVSLGHICGVSPSILGLTVLAWGNSIGDLMTNLTMASNGGAEGAQVAISGCYAGPIFNTLVGLGLSLVSSTWSKYPSSVVIPRDPYLLETLAFLVVGLVWALVILTRREMRLDGVLGGGLLVIYFISLFLRLIQTLGSIQLHDMLVLLFKR 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2223 570 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 299 559 - -
Glsi12g2223 570 Gene3D - 334 551 IPR044880 -
Glsi12g2223 570 Gene3D - 127 253 IPR044880 -
Glsi12g2223 570 Pfam Sodium/calcium exchanger protein 398 550 IPR004837 GO:0016020|GO:0055085
Glsi12g2223 570 Pfam Sodium/calcium exchanger protein 96 240 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2223 Glsi-ChrGlsi12 36853087 36854799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2223 1 559 Antiporters AT5G17850 52.389 8.95e-164 476