Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2222 ATGGCAACCTTCGGTAAACCTCTTCCCAGAAAACTTCTACTTTTCCTCAACATATCCTTCATCGTAACCCTCTCTCTCTTTCTCAAACCCTATCTCTACCCTTCAAATTCAAACTTTCATGACCAATATTCCAATGGTCCCCCCACAACCATCTTCAACCACCCTCGGGTCCTCCAAGATATCAGAGTTGATGGCTGCACCGACCTCCACAAGTTCTCAGATTATAGCTCCAAGTGCTTGTATGTCAAAACCCATCTTCACTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTTTACTGCAATTTTGGCGAATCCCCAATTCTGGGTCATGCCTTGCTTCTACTGTGGCTTGTGGTATTGTTCTATCTCTTGGGTGATACAGCTTCAAATTACTTTTGCCACTCTTTAGAAGGTTTGTCCAACATCTTGAGGCTATCTCCCACCATAGCTGGAGTGACCCTACTTTCTCTAGGAAATGGGGCTCCTGATTTTTTTGCTAGCGTTGTTTCCTTCACAAGTTCCAGCAATGGTGCAGTTGGCCTCAATAGCATTCTGGGAGGGGCTTTTTTTGTGTCTAGTCCTGTCTTGGGGATTATAACTATTCTAGTTAGCCCAAATCAGATTGAAGTAGACAAGGCCAGTTTCATCAGAGATGTGCTTTTCTTCTTTTTCTCTCTGTTGGTCCTCCTTGTGATAATTTCAATTGGTAAAATTAATTTGTTGGGTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCGGTCTCTGCCACACATTTCATCTATGGAGGGGAGAAGAAAGAGAGCGAATCAGCAGTATCTTCGGATGAGTTGGCAGAGTCCGGCATACCATTGCTGGGCTGCGTCGATGATGAAAAACCAAATTTAGCAGAGAAAGTGGCCGTTGAAGATAGCAAGGAAAAGCCAGAGAATTTTGACAGTGGTTCATTTAACTGTAATTACTTGGGCAAGTTTCTACAAGTACTGGAATTACCTCTTTGCTTACCCAGAAGATTTACCATACCACTTGTGAGTGAAGAGAAGTGGTCAAAGCCATACGCAGTTATATCTGTCACATTAGCACCAGTTTTGTTGGCTGCTATTTGTAATACCCAAAGGGAAAACGTGGATTCCAGGAGCAGTCTAGTTACGTACTTGACAGCTGCTTTGATTGGCATAGTTTTGGGGAATATGGCATGTGTGACCACCAAGAGCTGTGGCCCACCAAGAAAGTGCTTGTTCCCTTGGCTAGCAGGAGGGTTTGCTATGAGCGTGACATGGACTTACGTTATTGCCGAAGAACTGGTTTCGCTATTGGTTTCGCTTGGAAATATTATTGGGGTAAGTCCTTCAATTCTGGGGTTAACGGTCCTGGCTTGGGGTAATTCACTTGGGGATTTGATAGCCAATGGTGCCATGGCTGTGAATGGTGGGGCAGATGGGACCCAAATTGCTGTATCTGGGTGTTATGCAGGCCCCATGTTTAATACTTTGATGGGCTTGGGTTTGCCACTAGTTCTATCGGCATGGTCTGAATATCCATACCCATATGTGATTCCTAAAGACCCTTCCCTCTACGAGACACTCTTGTTCTTGATGGGAGGGCTGCTTTGGGCCCTTGTGGTATTGCCCAAGAGGAGCATGAGGCTGGATAAATTCTTGGGAGCTGGACTCTTAATCATATACCTTTGCTTTCTTTTTATAAGGATTGCAATGGCCATTGGGGGTATGAATTCCTAG 1752 0.4441 MATFGKPLPRKLLLFLNISFIVTLSLFLKPYLYPSNSNFHDQYSNGPPTTIFNHPRVLQDIRVDGCTDLHKFSDYSSKCLYVKTHLHCRSKGYINYLQIFYCNFGESPILGHALLLLWLVVLFYLLGDTASNYFCHSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTSSSNGAVGLNSILGGAFFVSSPVLGIITILVSPNQIEVDKASFIRDVLFFFFSLLVLLVIISIGKINLLGSICYVSIYFLYVCAVSATHFIYGGEKKESESAVSSDELAESGIPLLGCVDDEKPNLAEKVAVEDSKEKPENFDSGSFNCNYLGKFLQVLELPLCLPRRFTIPLVSEEKWSKPYAVISVTLAPVLLAAICNTQRENVDSRSSLVTYLTAALIGIVLGNMACVTTKSCGPPRKCLFPWLAGGFAMSVTWTYVIAEELVSLLVSLGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAVNGGADGTQIAVSGCYAGPMFNTLMGLGLPLVLSAWSEYPYPYVIPKDPSLYETLLFLMGGLLWALVVLPKRSMRLDKFLGAGLLIIYLCFLFIRIAMAIGGMNS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2222 583 Gene3D - 147 279 IPR044880 -
Glsi12g2222 583 Gene3D - 357 575 IPR044880 -
Glsi12g2222 583 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 15 581 - -
Glsi12g2222 583 Pfam Sodium/calcium exchanger protein 116 258 IPR004837 GO:0016020|GO:0055085
Glsi12g2222 583 Pfam Sodium/calcium exchanger protein 421 574 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2222 Glsi-ChrGlsi12 36849511 36851262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2222 64 583 Antiporters AT5G17860 52.975 1.44e-178 513