Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2220 ATGTCAGTAATACTGCTCAACGAGGTTGACAAACTCTCTAGAGAAGCCCAACATTCTTGCCGCAGAACAATGGAAAAATACAGTGCTTATTGCAGGTTAATTTTATGTTGCAATAGTTTGTCAAGAGTCACAGAAGCAATTCGATCTCGCTGTCTAAATGTGGGAATAAATGCACCAAGTGAAGAACAGATTGTTAAAGTGATAGAGTTCATTGGTAGGAAAGAAGGGCTGCAACTTCCTTTTGGTTTTGCTGCTCGCATAGCTGAGAAATCAAATCGGAATTTAAGAAGGGCTGTACTGTCATTTGAGACTTGCCATGTTCAACAGAACATAGGATGCGTCTTGGACGGAAGGCCATCTTCCACATCGAAGTATTTGGAGGTGAATTGCAAAAGCTCCGGTAAGACTAGTCGGTTTGCGGCAGGCACCGATGCCGGATTTGCTGTAGGATTGATAAATAGGAAGTTGAAGGGAGCGGATCCGCTGGCTTTGCATATAGAAGCAGTTAAAGAAGGGGAAGAGCCAATTGCTTTCGGTCCCAATTCAGTTCTTGTCCATTACGGAGATGGTTGGAAGTTGCAGACATTTGACGAATCGGATCTTAGTTTAGGCAAGTGCGGAGTGTCAGAAATGGAGACGATTTTCGATCTATGCCAATGCCGACTCCAGTTTCAGCCAATTGACAATTGTCATGGTAATGGAGAGCCTCGTCTACAGCTCGAAGCAACAAATACATTTTGGCTCCACCACTTTGACCTGGCAGAAACTGAAATATCAAAGCACCAGGTCTTGTCTCTCGTTTGCAGAACTTTTGATGAGTTGGATGGAAATGGCTAG 837 0.4385 MSVILLNEVDKLSREAQHSCRRTMEKYSAYCRLILCCNSLSRVTEAIRSRCLNVGINAPSEEQIVKVIEFIGRKEGLQLPFGFAARIAEKSNRNLRRAVLSFETCHVQQNIGCVLDGRPSSTSKYLEVNCKSSGKTSRFAAGTDAGFAVGLINRKLKGADPLALHIEAVKEGEEPIAFGPNSVLVHYGDGWKLQTFDESDLSLGKCGVSEMETIFDLCQCRLQFQPIDNCHGNGEPRLQLEATNTFWLHHFDLAETEISKHQVLSLVCRTFDELDGNG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2220 278 FunFam replication factor C subunit 3 60 112 - -
Glsi12g2220 278 Gene3D - 60 113 - -
Glsi12g2220 278 PANTHER MALTASE-GLUCOAMYLASE, INTESTINAL PROTEIN 120 202 - -
Glsi12g2220 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 104 IPR027417 -
Glsi12g2220 278 Gene3D - 1 59 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2220 Glsi-ChrGlsi12 36834215 36838854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2220 3 108 Core DNA Replication Machinery Family AT5G27740 80.189 1.41e-54 178