Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2185 ATGGAGCGTTGTTCTGATTATCTTCTCTCTCGTGATATCTGGTCCTCTTCTACGGGCGGTGGCACAACGCATAGCATACGAAGGGAATCAGTATTAGGGTTTCGGGAACTGATAATGGATTTGGCAGCGGAGAAGAAAGAATTAGAGAACAACAACAAGGCTTCCAATGCTAACAATAACCACACTAACACTGATTCTCCACAAGAAATTCTAGATTCTTCCCCTCCATTCGCATCTGATGCTTACAATACCGCTAATAAAGAAGCTGAAGAACGACAAGCTCGTGACCTCAAAGCTGGCCTTCATCCCCTCAAGCACAAATTTGTATTTTGGTACACCCGCCGAACACCTGGAGTCAGAAATCAGACATCATATGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTCCTATTGTCATCTTGCTCGCCCTTCTTCTTTGCCAAGTCCAACAGATTTGCACCTTTTTAAGGAAGGAATCCGCCCTTTGTGGGAGGACTCTGCTAACTGCAGTGGTGGTAAGTGGATTATACGATTCAAAAAGGTTGTGTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGCGACCAATTGGATTATGGAGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGCGTCTGGAATCGCAATGCATCTGATCATCAGGCTGTCATGGCTCTCAGAGATTCTATTAAACGTCACTTGAAGCTTCCCCATAGCTATGTTATGGAGTACAAGCCCCATGATGCCTCCCTCCGAGACAATTCATCTTACAGAAACACTTGGTTGAGGGGATAG 846 0.4433 MERCSDYLLSRDIWSSSTGGGTTHSIRRESVLGFRELIMDLAAEKKELENNNKASNANNNHTNTDSPQEILDSSPPFASDAYNTANKEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCSGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2185 281 Pfam Eukaryotic initiation factor 4E 103 261 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi12g2185 281 MobiDBLite consensus disorder prediction 52 81 - -
Glsi12g2185 281 SUPERFAMILY eIF4e-like 83 277 IPR023398 -
Glsi12g2185 281 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 55 270 IPR001040 GO:0003723|GO:0003743|GO:0006413
Glsi12g2185 281 FunFam Eukaryotic translation initiation factor NCBP 74 274 - -
Glsi12g2185 281 Coils Coil 31 65 - -
Glsi12g2185 281 Gene3D RNA Cap, Translation Initiation Factor Eif4e 74 274 IPR023398 -
Glsi12g2185 281 ProSitePatterns Eukaryotic initiation factor 4E signature. 159 182 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Glsi12g2185 281 MobiDBLite consensus disorder prediction 49 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2185 Glsi-ChrGlsi12 36548507 36552222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2185 69 281 Eukaryotic Initiation Factors Gene Family AT5G18110 78.404 1.67e-124 352