Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2151 ATGGGAACCCCACAATCCAATTTGCCACCTGGGTTTAGGTTCCACCCCACCGATGAGGAGCTCATTGTTCACTATTTAAGGAAGAAAGTGGCCTCCTTACCCTTGCCCGTTTCCATCATCGCCGAGGTTGATATCTACAAGTTTGATCCATGGCAATTACCAGAAAAGGCAGCCTTCGGGGAGAAAGAATGGTACTTCTTCAGTCCCAGAGACCGTAAGTACCCAAATGGTGCCAGGCCAAACAGGGCAGCTGCTACAGGGTATTGGAAGGCAACTGGGACTGACAAGACCATAGTGTCGTCATTGGCAGCCAGACGAGCCCCTGAGAATATTGGTGTCAAGAAAGCTCTGGTGTTCTACAAAGGAAGACCCCCGAAGGGTGTCAAAACTAATTGGATCATGCATGAATATCGCCTTCTTGACAACAACAGACCCATTAAGCTCAAAGACTCCTCTATGAGGCTTGATGACTGGGTTCTGTGCCGGATTTACAAGAAGTCTAAATATGCTTTATCATCAACATCAGAGGCATCAGTGGTAGGACAAGAAAATCGAGCAGAAGAGCAGCTTTTCCAAGAAACCCTTTTCCCGAGCTCAAGTAGTATTCCTCCTCCTCAAAACACGCTCACATCTCACAAGTCTTTGTCCTTCTCCAACCTGTTAGATGCCATGGACTACTCCATGTTGAGCAGCTTCTTGTCTGAGAACCATTCCGACCTACCTGGGTTGGGATCAAGTGCAGGCATTAACAGTGGGAACCTGGATCGGCAACCTTCCTCAAACAACAATAGCAGCCACAGCCACAGCCACTTGTTTCAGAAGCCCCCCCAATTGAACCTTTCAGTAGCAAACATGGAAAACAGCAGGCCCAAGCGCCAACTTTCAAGCATAGACGATCATACACTATACCCATCAAAGAAACACCTGAGTTCTTCTTGCAGTTTTCCTGAAACCAACCCCCAATACGACAACCCACAATGCAACTTCCTCTTGAAGCAGTCATTGTTGAATCAGCAGTTACTTCTGGGTCCTCATCTTCGATTTCAAGGATAA 1053 0.4729 MGTPQSNLPPGFRFHPTDEELIVHYLRKKVASLPLPVSIIAEVDIYKFDPWQLPEKAAFGEKEWYFFSPRDRKYPNGARPNRAAATGYWKATGTDKTIVSSLAARRAPENIGVKKALVFYKGRPPKGVKTNWIMHEYRLLDNNRPIKLKDSSMRLDDWVLCRIYKKSKYALSSTSEASVVGQENRAEEQLFQETLFPSSSSIPPPQNTLTSHKSLSFSNLLDAMDYSMLSSFLSENHSDLPGLGSSAGINSGNLDRQPSSNNNSSHSHSHLFQKPPQLNLSVANMENSRPKRQLSSIDDHTLYPSKKHLSSSCSFPETNPQYDNPQCNFLLKQSLLNQQLLLGPHLRFQG 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2151 350 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Glsi12g2151 350 FunFam NAC transcription factor 56 17 171 - -
Glsi12g2151 350 MobiDBLite consensus disorder prediction 243 272 - -
Glsi12g2151 350 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Glsi12g2151 350 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Glsi12g2151 350 PANTHER NAC TRANSCRIPTION FACTOR 56 8 222 - -
Glsi12g2151 350 SUPERFAMILY NAC domain 4 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2151 Glsi-ChrGlsi12 36373655 36374886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2151 4 350 NAC Transcription Factor Family AT3G04070 50.708 2.25e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi12g2151 NAM 1.8e-40 No_clan