Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2149 ATGTTAATTCATTACAGCCCTTTTTCTTTCCCTTTCCATCATCTCTTGTTCTTTCCCACCTCTCCTGCTGCTGTTGGGACTCCAGCTTTTAGCTCATCATTCAATATCATGTTGCCTTTAGCCAAGATTAGATATGAAACAATACATATTTGGATACAGTTGCATCTTACGTACAAACAGAATCAGGACGCAGACACTGACACACAAAGCACGTTTCTGTCACTACACCGAGTGATTAGGCAGGGAGGGAGACGACAGAAATTTCCTTCAGAGCTCGGTCATCGCCATCACCATCTTCTTCTTCTTCTTTGCCCCATAGCCAACAGCCATTTCTGTTGGCGCGTGCCAATATCGATAGCACTGAATTCGACCACCGTTTTCACATGCTCGTCCTTTTCAGATTCTTCAAGTTGCAGCCAATTAGATCACTTTCCATCAATTTGTAGAAAATCCCAAGACATAGAGCTGGAGCCGCTACAAGAACCCAAGCAGTTGAAGGGTTCCCCTGCTCCTGGGAACGGTCAGATCCGGTATCGATCGCCATCCTCGGCTGATCTTTTTGAATACCAGGGCAACAATTCTCCACCGTCGCATTCCGCCGATCAACACCTACTCGAATTCGAATCTAGCAAAATGCTCAAGCGTCCCGGCCGTCAAGAGTCTTTCACCGATAAGATCTACAGGTTCCGAGGGGTTCTGATAGTGGTTTCAGTCCCACTCCTTCTCATCACTTTTGTACTCTACTTAATGCCTGCAAGCACTTCTAACCAGTCCATTCAGGGCTATGCTCTCCCTCATCGTAAAATCCCCTCTGACCAGAAATTCTCAAACTCCTATGCCGTCATCTTTGATGCCGGTAGTTCTGGTAGCCGTGTACACGTCTTCCATTTTGACCACAATTTGGATCTCGTTCACATTGGCAAAGATCTTGAGCTTTTCGTGCAGATTAAACCGGGTTTGAGTGCATACGCTCAGAATCCCCAGCAAGCCGCGAATTCCCTCATTTCCCTTTTAGACAAAGCGGAAAGTGTTGTTCCCCGGGAGTTACGCCCAAAGACACCCGTTAGAGTTGGGGCAACGGCAGGTTTGAGGGCTTTGGAAGGAGATGCTTCTGATAAGATCTTGCAAGCTGTTAGGAATTTGCTCAAGGAAAGAAGCACCCTAAAATCTGAGGCTGATGCAGTTGCTGTACTGGATGGAACCCAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTATTGGGAAACTTGGGAAAAACGTATTCAAATACAGTTGGAGTAGTTGATCTTGGGGGTGGATCTGTTCAAATGGCATATGCCATCTCAGACACAGATGCTGCCAAGGCTCCAAAATTACCAGATGGAGAAGATCCATACATAAAGGAGATGTTCTTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGATTACTAGCAGCTCGTGCAGAGATATTAAAGGTTTTTGAAGATTCTCACAACCCTTGTATCTTATCTGGCTTTGATGGATCTTACAAATATGGAGGAAAGCTGTATAAAGCCTCTGCATTCCCTTCGGGTTCAAGCTTGAATGAATGTAAAAGTATAGCTCTCAAGGCTCTCAAAGTTAATGAGTCAACATGCACTCATATGAAGTGTACTTTTGGTGGTATATGGAATGGTGGAGGGGGAGATGGACGGAAAAATCTTTTCGTTGCTTCATTTTTCTTTGACCGGGCTGCCGAGGCTGGTTTTGCTGATCGAAACTCACCTGTTGCCAAAGTTCATCCTGTGGATTTTGAGGATGCAGCTAAGCGAGCTTGTGAAACAAAACTAAAGGATGCCAAAGCTACTTATCCACATGTTGAGGAGGGGAATCTTCCATTTATATGCATGGATCTTGTATACCAGTATACATTGCTTGTTGATGGATTTGGCCTAGATCCATGGCAAGAGATTACATTGGTGAAGCAAGTTAAATATCAGGATTCCCTTGTTGAAGCAGCATGGCCCCTAGGCAGCGCCATAGAAGCCGTATCATCATTAACATAA 2046 0.4482 MLIHYSPFSFPFHHLLFFPTSPAAVGTPAFSSSFNIMLPLAKIRYETIHIWIQLHLTYKQNQDADTDTQSTFLSLHRVIRQGGRRQKFPSELGHRHHHLLLLLCPIANSHFCWRVPISIALNSTTVFTCSSFSDSSSCSQLDHFPSICRKSQDIELEPLQEPKQLKGSPAPGNGQIRYRSPSSADLFEYQGNNSPPSHSADQHLLEFESSKMLKRPGRQESFTDKIYRFRGVLIVVSVPLLLITFVLYLMPASTSNQSIQGYALPHRKIPSDQKFSNSYAVIFDAGSSGSRVHVFHFDHNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAANSLISLLDKAESVVPRELRPKTPVRVGATAGLRALEGDASDKILQAVRNLLKERSTLKSEADAVAVLDGTQEGAFQWVTINYLLGNLGKTYSNTVGVVDLGGGSVQMAYAISDTDAAKAPKLPDGEDPYIKEMFLRGRKYYLYVHSYLGYGLLAARAEILKVFEDSHNPCILSGFDGSYKYGGKLYKASAFPSGSSLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGRKNLFVASFFFDRAAEAGFADRNSPVAKVHPVDFEDAAKRACETKLKDAKATYPHVEEGNLPFICMDLVYQYTLLVDGFGLDPWQEITLVKQVKYQDSLVEAAWPLGSAIEAVSSLT 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2149 681 Gene3D Exopolyphosphatase. Domain 2 399 658 - -
Glsi12g2149 681 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 398 413 IPR000407 GO:0016787
Glsi12g2149 681 FunFam Apyrase 1 399 658 - -
Glsi12g2149 681 Pfam GDA1/CD39 (nucleoside phosphatase) family 276 679 IPR000407 GO:0016787
Glsi12g2149 681 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 223 679 IPR000407 GO:0016787
Glsi12g2149 681 Gene3D - 279 674 - -
Glsi12g2149 681 CDD NBD_sugar-kinase_HSP70_actin 281 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2149 Glsi-ChrGlsi12 36354909 36361985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2149 217 679 Calmodulin-binding Proteins AT3G04080 68.683 0.0 630