Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2148 ATGGTTAGTGCGATAAAGGCTGCGATTGGAGATGCGGTGTTGACTTTTTTGTGGGTCTTCTGCGCATCCACTCTGGGATTAGCCACTGGCACCATAATCACAGAACTTGGGCTTCAGCATCTATCCTACAATGGTCTTAATTACGCTTCTTTTCTCGTCACCACTGTCCTCGTCTTCATCCTCGTTTTCGTCTTCACCATCATCGGCAATGCCTTGGGTGGTGCCAGCTTCAACCCCACCGGTACTGCTTCCTTTTATGCCGCTGGTCTCGGCTCTGATACCCTTATCTCCATGGCTTTCCGTTTTCCTGCTCAGGCGCTAGGTGCTGTGGGTGGTGCTCTGGCAATTATGGAGGTGATGCCACCAAAATACAAGCACATGATCGGCGGACCTTCTTTGAAAGTTGACTTGCATACTGGAGCTGTTGCTGAAGGAGTTCTGACATTCCTGATTTCTTTTGCTGTCCTTTTTATTATACTCAGGGGACCTCGCAGTGAGCTTTTGAAGACTTGGTTGCTGGCCATGTCAACCGTGACTTTGGTCATGGCTGGCTCTGCTTACACCGGGCCCTCCATGAATCCTGCCAATGCCTTTGGTTGGGCATACATGGACAACTGGCACAACACATGGGACCAATTCTACGTTTACTGGATTTGCCCTTTCATCGGAGCAATATCGGCTGCATGGCTGTTCCGCGTGGTGTTTCCCCCACCACCGCCAGTAGTGAAACAGAAGAAAGCCTGA 744 0.504 MVSAIKAAIGDAVLTFLWVFCASTLGLATGTIITELGLQHLSYNGLNYASFLVTTVLVFILVFVFTIIGNALGGASFNPTGTASFYAAGLGSDTLISMAFRFPAQALGAVGGALAIMEVMPPKYKHMIGGPSLKVDLHTGAVAEGVLTFLISFAVLFIILRGPRSELLKTWLLAMSTVTLVMAGSAYTGPSMNPANAFGWAYMDNWHNTWDQFYVYWICPFIGAISAAWLFRVVFPPPPPVVKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2148 247 Gene3D Glycerol uptake facilitator protein. 1 243 IPR023271 -
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi12g2148 247 PANTHER AQUAPORIN SIP1-1 4 247 IPR044222 GO:0015250
Glsi12g2148 247 FunFam Aquaporin SIP1-1 2 247 - -
Glsi12g2148 247 SUPERFAMILY Aquaporin-like 3 242 IPR023271 -
Glsi12g2148 247 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2148 Glsi-ChrGlsi12 36350403 36354867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2148 2 246 Major Intrinsic Protein MIP AT5G18290 54.065 2.85e-85 252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2148 12 36350403 36354867 Glsi12g2148 12 36350403 36354867 ECH