Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2126 ATGATGAACCGATTTGCTTCGTCGTCTTCCAAGGCCAAAAAGAAGCAAACAGCAACAACAAGCGCCAAGACACAAGAGCAACAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCATGGGGAAGATACGCGGCGGAGATTAGAGACCCTTCCACCAAAGAAAGGCATTGGCTTGGCACCTTCGACACTGCTGAGGAAGCAGCCTTAGCGTACGACAGAGCAGCACGTTCCATGCGCGGCTCTCGTGCCCGAACCAACTTCGTCTACTCCGATACTCCTCCGGGCTCTTCCGTCACCCCCATTATCTCACCCGATGAAGAAAACCACCAGAACCACGACTTCTCGTCTCTCTTCGCCCCGAACTCGCTCACACATCAACCCGACCCGAGTAATCAGCCCACGGAATGCAATCTCTCGGGCGGGTTCCTGGGGCTCACGGATAATAACACCTGGGCAGCTTCTTCGGGGGCTTATTCCCAACAATATCAAGGACCCAACATGGACGCGCATAACGAAACCCATTTCCACCAACTGTATGATGACAACAGCGCTGAGCTTCCTCCCTTGCCACCTGATATTACCAGCTCTACGGGTTATGAAATGGGCCAAGGGTTTTACGAGAATGAATTTGGGTATTCGGAGCAGAGGACGGGGATGGGATTTGAATCGTCAAGCTGGTCGTCGTATTCATATATGGGTTTGGATTCGGGTGAGTACCTGGATAGCCCATTGTTGAGCACAATGCCAGCGGTGTCAGAGAAAGGGCCAGAGGGTTTTGATTTGGGGAGTTCCTCTGCCAATTCGTATTTAAGCCAAAGTTCGGAGCACGGAGATGTGAGAGAATATCGGGTTGGGTCAGTGGCTTTCTGCACCAGCTTCACGCCCGGAGAAACAGAGACCGGCGACAGACCTGATTCCAGCTTCGCTGCGTCCTTCATGGAACTGGAATCTGGAGTTTCCTCTCACCGGAATCCTTCTCAGTTATCATGGGTAAACCTCTCTAGGAATCTAATATTAGCATATCAAAGCTTTGGTGTAGTATATGGAGATTTAAGTACATCACCTCTCTATGTTTTCACAAGCGCTTTTGAAGGAAAATTGAAGAAGCACCATGATGAAGAAACTATCTTTGGCGCTTTTTCATTGATTTTCTGGACTCTGACATTCATACCTTTGCTTAAATATGTAATCATCCTGCTGAGCGCTGATGATAATGGTGAAGGTGGGACATTTGCTCTCTATTCACTGCTTTGTAGGCATGCCAAGTTCAATTTACTTCCCAACCAACAAGCAGCTGATGAGGAGTTGTCATCTTACAAATATGGTCCCTCATCACAGGCTGTAACCTCTTCCCCACTGAAGAGGTTTCTGGAGAGGCATAAAAGGTTAAGAACAGCCTTACTTCTTGTGGTATTGTTTGGTGCTTGCATGGTCATAGGCGATGGTGTGCTTACTCCAGCAATTTCAGTTCTATCATCAGTATCAGGAATACAAGTTACAGAGAATAAATTCACTGATGGTGAACTTGTCTTGCTTGCTTGTGTCATATTGGTTGGCCTGTTTGCTCTCCAGCATTTTGGCACCCATAAAGTAGCTTTTATATTTGCACCAATTGTAATCGTCTGGCTTGTATCAATTTTTTCTGTTGGACTGTATAATACCATACATTGGAATCCAAAAGTAGTTCGTGCTTTATCTCCTCACTATATCTTCAAGTTCTTCATCAAGACTGGTAAAGAAGGTTGGATTTCTCTTGGAGGGATTCTTCTCTGTATTACTGGAACTGAAGCTATGTTTGCAGATCTCGGTCATTTCACTGCTTCTTCGATAAGGCTTGCATTTGCTTTTGTTATATACCCTTGTTTGGTAGTACAGTACATGGGCCAAGCTGCTTTTCTGTCTAAAAACCTCAACTCTATCCATAACAGTTTTTATAACTCAATTCCTGAACCTGTGTATTGGCCTGTCTTTGTTATTGCCACCCTTGCAGCTATTGTTGGGAGTCAAGCTGTTATCACTGCCACTTTCTCCATTATCAAGCAGTGTCATGCACTTGGTTGCTTTCCACGAGTCAAAGTTGTACACACCTCAAAACATATATATGGACAGATCTACATCCCAGAAATTAACTGGATACTTATGATCCTTACTCTTGCTATAACTATTGGATTTCAGGACACAACCTTAATTGGAAATGCTTATGGACTTGCTTGTATGACGGTTATGTTTGTGACTACATTTCTGATGGCTCTTGTCATAATCTTCGTCTGGCAAAGAAGTGTTTTGCTCGCTGCAGTATTCCTTCTATTTTTTTGGATGATAGAGGCTGTATATCTATCAGCAGCTTTCACAAAAGTGCCTCAGGGAGGATGGGTTCCTATTGTCCTATCAGTCTTCTTCATGGTTGTCATGTATGTATGGCATTATGGTACTCGTAGAAAATATAGCTACGATCTACACAACAAAGTTTCGTTAAAATGGTTACTAGGCTTGGGCCCTAGCCTTGGCATTGTCCGTGTCCCAGGGATTGGCCTCATATACTCAGAACTGGCAACAGGAGTACCTGCAATATTTTCTCACTTTGTAACAAATCTCCCTGCATTTCACAAGGTTTTGGTTTTTGTTTGTGTAAAATCAGTTCCGGTTCCATATGTCTCACCTGAAGAACGTTTCCTAGTTGGGCGAGTTTGCCCCAGACCCTATCGTATGTATAGGTGCATTGTTAGATATGGGTATAAGGACATTCAAAGAGATGATGGAGAGTTTGAGAATCAGCTAATACAGAGTATAGCAGAGTTCATCCAGATGGAAGCAGTTGAACCATATTTCTCAAGTTCTGAAAATTCTTCACTTGATGGAAGGATGGCTGTTATAAGTACTAGAAGCCTAGAATCAACTTCAAGTTTAATAGTGTCTGAGCATGAGGATGTTGTTGGTATGGACGACTCCATCGCTAGCAGCAAATCTTGTACCCTGCAAAGTTTGCAGTCCATATATGATGATGAAACCCCACAAGTTAGGAGGCGAAGAGTAAGATTTCAGCTACCCAACAATCCGGGTATGAATCCTGCTGTTAGGGATGAGCTTTTGGATTTAATTCAAGCTAAGGAATGTGGGGTTGCGTATATAATGGGTCACTCATATGTGAAGGCAAGGAAATCGTCATCGTACTTGAAAAAGCTTGTGGTTGATATTGGGTACTCATTTCTACGGAAGAATTGCAGAGGTCCAGCTGTGGCCCTTAACATTCCTCACATTAGTCTTATCGAAGTCGGAATGATATATTATGTCTAG 3309 0.4418 MMNRFASSSSKAKKKQTATTSAKTQEQQHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTPIISPDEENHQNHDFSSLFAPNSLTHQPDPSNQPTECNLSGGFLGLTDNNTWAASSGAYSQQYQGPNMDAHNETHFHQLYDDNSAELPPLPPDITSSTGYEMGQGFYENEFGYSEQRTGMGFESSSWSSYSYMGLDSGEYLDSPLLSTMPAVSEKGPEGFDLGSSSANSYLSQSSEHGDVREYRVGSVAFCTSFTPGETETGDRPDSSFAASFMELESGVSSHRNPSQLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFEGKLKKHHDEETIFGAFSLIFWTLTFIPLLKYVIILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAVTSSPLKRFLERHKRLRTALLLVVLFGACMVIGDGVLTPAISVLSSVSGIQVTENKFTDGELVLLACVILVGLFALQHFGTHKVAFIFAPIVIVWLVSIFSVGLYNTIHWNPKVVRALSPHYIFKFFIKTGKEGWISLGGILLCITGTEAMFADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSIHNSFYNSIPEPVYWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTLIGNAYGLACMTVMFVTTFLMALVIIFVWQRSVLLAAVFLLFFWMIEAVYLSAAFTKVPQGGWVPIVLSVFFMVVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLVGRVCPRPYRMYRCIVRYGYKDIQRDDGEFENQLIQSIAEFIQMEAVEPYFSSSENSSLDGRMAVISTRSLESTSSLIVSEHEDVVGMDDSIASSKSCTLQSLQSIYDDETPQVRRRRVRFQLPNNPGMNPAVRDELLDLIQAKECGVAYIMGHSYVKARKSSSYLKKLVVDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2126 1102 FunFam Ethylene-responsive transcription factor 2 36 94 - -
Glsi12g2126 1102 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Glsi12g2126 1102 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Glsi12g2126 1102 Pfam K+ potassium transporter 346 919 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi12g2126 1102 Pfam AP2 domain 37 85 IPR001471 GO:0003700|GO:0006355
Glsi12g2126 1102 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Glsi12g2126 1102 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 340 1101 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi12g2126 1102 MobiDBLite consensus disorder prediction 1 31 - -
Glsi12g2126 1102 NCBIfam potassium uptake protein 344 1102 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi12g2126 1102 SUPERFAMILY DNA-binding domain 36 94 IPR016177 GO:0003677
Glsi12g2126 1102 Gene3D AP2/ERF domain 36 94 IPR036955 GO:0003700|GO:0006355
Glsi12g2126 1102 CDD AP2 36 92 IPR001471 GO:0003700|GO:0006355
Glsi12g2126 1102 MobiDBLite consensus disorder prediction 1 35 - -
Glsi12g2126 1102 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2126 Glsi-ChrGlsi12 36246539 36255487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2126 321 1102 Inorganic Solute Cotransporters AT3G02050 79.363 0.0 1246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi12g2126 K_trans 2.3e-192 CL0062