Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2123 ATGCAAACAGACACTTGCTTCCGGTGCCATCAACAGGGTCATTGGGCTCGCCATTGCCCTCGTAACTCTCCCACCACCATATCTCAGACAACCATCACTGATGATTCCGGTATCACCAAGATTCATTGTCGATGCGGTCATGGGTTTTGCGAGTTAAAAACTGCCACCAACCAATTGAACCATGGCAGGAAGTACTATGTCTGCCCCATCAAAAGGGGGAAAAAATGTAGAGACTTTATTAAATGGTGTGATGCTTCAATCGATGAGAGTGATTTACATCCTCCGCCGTATAAATATCCGGAATGTCGTTGCGGGGCCGGAGTGTGTCGAAAGGAAAAAGATAAAAGCTTCCCTAATGCGGGACGATATTACTTTGCTTGCCCTGTGGCAAAGGACCATGGATCTTGCAGTTTTCACTTGTGGGAGGATACACTTTTTGATACCAAAAGCATTCTTCCTGTCCGGAAAAGCAGTCAAAGATCGCTTCTTTTTGTCTGGGAGGGTCACGAAGTTGAGAAAATGAATAAAAATGAATTGGGTAAGGGAGGTGATTTACAAGTACAGAATTCCAAAAGGACAAGAACCGTGGATGATTCTCAGTACTCCTCAATCATGGCTCTATCTGAGCTTTCAGAGAGAGAAGATACAGTGATAAAGGCAGCCCCAATGGAGAGAGAGGACCATGATGAAACCACTTCATTATCAACTCATTCAAAACATGCTGATTTTCCAGAATTTGAGGTTGCTGATGATCTCCAGGATTTAGATATCACAAACTCAGTGTCATGGGAATCTATTGAGGAGGAAGCATTTGTAGTATCTCATCTATCAACACCTCGCTGGTCCTGTTCTCGACTGAGGGGGTTTGAGAGTCAAATTCCTACCATTGTTGATGCACCTTTTGGTATTTTCCCATCTTTTAATGCTATTGTCGTTCCTGAACAAGAGAGTATTCATGATGATCCTCGTAGTGAATCTGACCAGCTTGTGTTAAGCAATTCAAGTCAACCTGTGCAACTTTCAAATGGTTACCATACTGAGTTTTCAAGGGATGCATTTAGTCCCAACATATTACTAGGCAGTAAAAGAAAGCCAATGTCCAAGGCCGAAAGGCAAAGGCAAATGGTATTATTTGCGCAGCAGCAACTTCTCATTGATCTTAAGACCTTGAATCCTCTTGACCACGAGTCTATGAGAGAGGCAGCAGAGGCTACTTTTGATGTGTTGAATAGTTTATCAGTTGAATATAAACAATTTTCTGATCATGTTTGGGAATTCATCAACTGTGCATCATCTTTAGTAGAAATTCAGAAGTGCATGGAAAACTACCTTTCTCCAGAAGAGTACATTCAACGTTATGAGGAGGAAAAAGTGAGACTAGCTAACATTTGCGACAACTATGTCAAGACTAAGGCTTCCCTTGAAGTATCTCATGAGCTTAGTCAATCACTGCACGAAGAAGCCTCGCGGCTGAAGGCCATGATCCTTGAAATAGAAAATCAATTAATCTCCTGTGAGTCAGAGACCTTGATGATGGAGACTAATCTTGGTGAGATCAAAAGAAGTATGCGGGAGGCTGAAAGAAGCTTAAAGATGGCAGCTGAGGAAGCTGAAATGGCAAGAAAACTCAATGAAGAGAGAGAAGCAAAGCAAAGTGTTGCCAGGAGCGCACTGGAGAAGGCCAAGCTTGAACTAGAAAAACGATGTTATATGTCAGTGTAA 1722 0.4245 MQTDTCFRCHQQGHWARHCPRNSPTTISQTTITDDSGITKIHCRCGHGFCELKTATNQLNHGRKYYVCPIKRGKKCRDFIKWCDASIDESDLHPPPYKYPECRCGAGVCRKEKDKSFPNAGRYYFACPVAKDHGSCSFHLWEDTLFDTKSILPVRKSSQRSLLFVWEGHEVEKMNKNELGKGGDLQVQNSKRTRTVDDSQYSSIMALSELSEREDTVIKAAPMEREDHDETTSLSTHSKHADFPEFEVADDLQDLDITNSVSWESIEEEAFVVSHLSTPRWSCSRLRGFESQIPTIVDAPFGIFPSFNAIVVPEQESIHDDPRSESDQLVLSNSSQPVQLSNGYHTEFSRDAFSPNILLGSKRKPMSKAERQRQMVLFAQQQLLIDLKTLNPLDHESMREAAEATFDVLNSLSVEYKQFSDHVWEFINCASSLVEIQKCMENYLSPEEYIQRYEEEKVRLANICDNYVKTKASLEVSHELSQSLHEEASRLKAMILEIENQLISCESETLMMETNLGEIKRSMREAERSLKMAAEEAEMARKLNEEREAKQSVARSALEKAKLELEKRCYMSV 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2123 573 ProSiteProfiles Zinc finger GRF-type profile. 102 145 IPR010666 GO:0008270
Glsi12g2123 573 ProSiteProfiles Zinc finger GRF-type profile. 43 86 IPR010666 GO:0008270
Glsi12g2123 573 Coils Coil 481 501 - -
Glsi12g2123 573 Coils Coil 516 560 - -
Glsi12g2123 573 PANTHER OS07G0190500 PROTEIN 98 521 - -
Glsi12g2123 573 Pfam GRF zinc finger 100 144 IPR010666 GO:0008270
Glsi12g2123 573 Pfam GRF zinc finger 42 85 IPR010666 GO:0008270
Glsi12g2123 573 SMART c2hcfinal6 5 21 IPR001878 GO:0003676|GO:0008270
Glsi12g2123 573 Gene3D - 1 32 - -
Glsi12g2123 573 SUPERFAMILY Retrovirus zinc finger-like domains 2 23 IPR036875 GO:0003676|GO:0008270
Glsi12g2123 573 ProSiteProfiles Zinc finger CCHC-type profile. 6 21 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2123 Glsi-ChrGlsi12 36220807 36223675 Wgd