Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2111 ATGGAAACTAGCACTAAAGAAGACGGAGAAATTGAGAAATTTGAATTTGAGGCCTCCGAGATTGAGTACGTGAGTTACGGCGGTGAACATCACCTTCCCCTCGTCATGAACCTCGTGGACCAAGAGCTCAGCGAGCCCTACTCTATCTTCACGTACCGTTACTTTGTTTATCTCTGGCCTCAGCTTTCTTTCCTGGCATTTCACAAAGGTAAATGTGTGGGCACGGTGGTTTGTAAGATGGGGGATCATCGTAATACTTTCAGAGGCTACATTGCGATGCTGGTTGTGATCAAGCCCTATAGAGGAAGAGGCATTGCTACAGAACTTGTTACTAGATCTATCAAAGTGATGATGGAATCGGGTTGTGAAGAGGTCACATTGGAAGCAGAAGTCACAAATAAAGGAGCACTAGCTTTATATGGGCGTCTTGGCTTTGTTAGGGCCAAGCGGCTCTATCACTATTATTTGAATGGAGTTGATGCTTTTCGTCTGAAACTTCTATTTCCCCGCCCAGAGTTACACCCATCTTTGCCTACGATGGCAGATGTAGATGACAACCACAGGCATATTGACCATGGACCATATGAAGAATGA 594 0.4512 METSTKEDGEIEKFEFEASEIEYVSYGGEHHLPLVMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFVRAKRLYHYYLNGVDAFRLKLLFPRPELHPSLPTMADVDDNHRHIDHGPYEE 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2111 197 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 6 172 IPR044542 GO:0004596|GO:0017196
Glsi12g2111 197 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
Glsi12g2111 197 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016747
Glsi12g2111 197 Gene3D - 28 190 - -
Glsi12g2111 197 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 169 IPR000182 GO:0016747
Glsi12g2111 197 FunFam N-alpha-acetyltransferase MAK3 isoform A 28 185 - -
Glsi12g2111 197 CDD NAT_SF 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2111 Glsi-ChrGlsi12 36139878 36141611 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi12g2111 Acetyltransf_1 1.2e-16 CL0257