Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2109 ATGACTGATATGCTATACCTGGCTTGGCAGTCCTCACAGGCTGCTGATGGTCAGCATCTCATTCTTCGTCCACTGCACATGAAGTGTATACTTCACCATTATGGTAGCTATGATTTGCTTCTACAAAGGTCTGGGTTATTGAACCTGGAGCCCAAATCTCAATCGGGATTACGTCAAATGTCGGACTTGCAGCCACTGAGTGGAAGGTTTGACGAGGCTGAGAGATTGATGGCTCAGATGCCTTTTGAACCTGATGAAATAATGCGGTTAATAATTCTCAACTCATGTAGAATCCACAAGAATCAAGAGTTGGCAAAGAAAGTGGCCGACCTACTATTCAATACGAAGGAAATAAAAAATTTGAAAAGTAATGCTCTAGATTCAGATTTAATAACACCAACATCCCAGCCTAAATTTTATGCACGTATCCAAAAAATTTCAAAATATTACATACATACCTCAATATCGCCAGATCCAACTCATTAG 486 0.4012 MTDMLYLAWQSSQAADGQHLILRPLHMKCILHHYGSYDLLLQRSGLLNLEPKSQSGLRQMSDLQPLSGRFDEAERLMAQMPFEPDEIMRLIILNSCRIHKNQELAKKVADLLFNTKEIKNLKSNALDSDLITPTSQPKFYARIQKISKYYIHTSISPDPTH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2109 161 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 67 128 IPR046960 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2109 Glsi-ChrGlsi12 36118384 36121145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2109 8 55 C3H Transcription Factor Family AT3G26730 54.000 6.79e-09 52.0