Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2100 ATGGCTCTCTCTGACATCTCACGCCGCCAATCTCTGATCCCAAGCTTCCTCTACTCCTCATCTTCCTCCCCCAATACCTTACCTTTGCAGATGATGCTCAGCTCTATCCCCGTCGCCGTCTCTTCGCCGGCTTCCAATCTCGACGGAGGATCGTGCAGGACGAACTTCATGATTCCAGCTCCAAGTGAACCTGGCAAGATCGAGATGTACTCGCCTGCCTTCTATGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGCCTCACTCACACGGCGGTTACACCTCTTGACCTAGTCAAATGTAATATGCAGATCGACCCTGCTAAGTACAAGGGCATAACGTCTGGCTTTGGAGTATTGTTTAAGGAGCAGGGAGTAAGGGGATTTTTTCGGGGCTGGGTACCTACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGATTCTATGAGTTTTTCAAGAAGTACTATTCTGATATTGCTGGTCCAGAGTATGCGGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGATGTTGCCCTTTGCCCAATGGAGGCCGTGAAGGTTCGAGTTCAAACTCAGCCCGGCTTTGCTAGAGGTCTGGCTGATGGGCTCCCAAAATTTGTTAAATCGGAAGGAGCTTTGGGGCTCTACAAGGGAATAGTGCCTCTGTGGGGACGACAGGTTCCGTATACAATGATGAAGTTTGCTTCTTTTGAGACTATTGTCGAGATGTTCTATAAGTATGCCATCCCCACGCCAAAGAACGAGTGCAGCAAAACTCTGCAACTGGGCGTGAGTTTTGCTGGTGGATATGTAGCCGGTGTATTATGTGCTGTTGTGTCTCATCCTGCGGACAACCTTGTCTCTTTCCTGAACAATGCCAAGGGAGCAACAGTTGGTGATGCTGTGAAGAAGCTTGGTTTGTGGGGTCTTTTCACCCGTGGACTCCCTCTCCGTATTGTTATGATTGGAACTCTCACAGGAGCTCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACCACTGGCGGTGTTGCTCCCGCTGCTGTTCCTGCCACTGAGCTTGCAAAGGTGTAG 1119 0.4978 MALSDISRRQSLIPSFLYSSSSSPNTLPLQMMLSSIPVAVSSPASNLDGGSCRTNFMIPAPSEPGKIEMYSPAFYAACTFGGILSCGLTHTAVTPLDLVKCNMQIDPAKYKGITSGFGVLFKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLADGLPKFVKSEGALGLYKGIVPLWGRQVPYTMMKFASFETIVEMFYKYAIPTPKNECSKTLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAVPATELAKV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2100 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Glsi12g2100 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Glsi12g2100 372 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Glsi12g2100 372 Pfam Mitochondrial carrier protein 174 258 IPR018108 -
Glsi12g2100 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Glsi12g2100 372 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
Glsi12g2100 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 361 IPR044677 GO:0005315|GO:1990547
Glsi12g2100 372 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
Glsi12g2100 372 Gene3D Mitochondrial carrier domain 62 166 IPR023395 -
Glsi12g2100 372 Gene3D Mitochondrial carrier domain 167 352 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2100 Glsi-ChrGlsi12 36078388 36081809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2100 7 368 Chloroplast and Mitochondria Gene Families AT5G14040 80.000 0.0 586