LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g2076	ATGGAGAACCTTGCTGAAAATCCCGACAAAGAGGAGCAGAACAAGACCCACGAGACACCCCGTTCGCCATTACCGGACCCTAGAGAGGCTGACAGTGATGATGTCAAACCAGATGATGATTCCGAGGCAGTAGCGGTTACAGAGGGAGAGACAAAAGATGAGGTCGTTAAGGTCCCGGAGTCTCCTCCTCCCACCCTCGAGAAGGTTTCAGCAGACATCGATTCATGGATGGTGACTCTGCAGCAGAATGAAAATTTCCAAGAAGCTTCTTTACAGATCCCTGATTGCATTGACAAGTTCTTGTATCTCGTCGAAGAGAATATAGTCAGGTACGATACGGGTGAAGCCAAAGCCAAATGGGGCGAGATTCCGGAGCAAGATTCTTCATTTCTGGAATCTGTAAATCGGATTCAAAAGCTGGTGAAGTTGCTGAGCCAGTCGGAGTCTTCCTCGGAAGAGACTAATCAGCGAAAGGATTCGTTGGTCAACCGCATCGGGGACATTAAACAGCAAGCCATGTCGTATTTGGAGGAGGAATTCCGGTTGCTCATGGAACAATCTCGAAACCAAGGTGAATCGGATTCCGGTGGTCATGACCCGAAGGGTAAGCAGGTAGAACCTGACCATTGCCAATTGCTGGATCCTGAACGCACAGGAGCGGACACAGATTTTCCGGGTTATCCTGAGGAAACCGTTACCAGTTTGAATAAGATTGCAAAAGAGATGATATCGGCTGGGTACGAATCCGAGTGTTGCCAGGTTTATATCATTTCAAGGAGGCAGGCTTTCGAAGAGAGACTGCGCAAGCTAGGGTTCGAGAAAATCAGCATCGACGAGATTCAGAAAATGCATTGGGAGTCATTAGAGAGAGAGATCCCTACATGGATCACAACCTTCAAGGAATGCACCTCTGTTTACTTTGCCGGCGAGCGGAAGCTGGCGGAGGCTGTGTTCGCAGAGCACCCATCTATAGGGGCGAGCCTCTACAGCAACCTGGCTCGTGGCGTCGTCATACAGCTTCTCAATTTCGCCGAAGGCGTCGCCCTGACCAAACGCTCCGCGGAGAAGCTATTCAAATTCCTGGACATGTGCGAGACCTTGCGGGATGTGATTTCAGCCTTCGACGATCTGTTCCCCGAGGACTCTGGGAGCGAGCTCAAGATGGAAACGACGTCGGCGAAAAGCAGACTCGGAGAGGCCGCCATATGCATATTCTGTGATCTAGAGAACTCGATCAAATCGGAAACGGGGAAAACTCCTGTTCCCGGCGGTGCGGTTCATCCATTGACTCGTTACGTCATGAACTATCTCCCATACGCATGCGAGTACAAGGACACGTTGGAGCAGGTGTTCAGGGAGCACTCGAAGATTGAACGCGCTGACTCAACGAGTAGGCCCCACCCCGAAGGCGAACAAGGAAATGCTCAAAACGACGGCGAGGACAAGGAGGAATCGCCGTTCGCGGCGCAGGTGATGAGGGTGATGGAATTGCTGGACTCAAGTCTTGAAGGGAAGGCGAAGCTGTACAGGGACGGGTCGTTGAGCTGCATATTCATGATGAACAACGGGAGGTACATATTGCAGAAGATCAAGGGGTCGTCGGAGATATACCAAGTGTTGGGCAACACGTGGTGTCGGAAGAGGTCGTCGGATCTAAGGACGTACCATAAGAACTATCAGAGAGAAACGTGGAGTAAGATATTGACTTGTCTAAGCCACGAAGGGTTGAGCGTGAACGGGAAGGTGCAGAAGCCAGTGCTGAAGGAGAGGTTCAAGAGCTTCAATACGATGCTCGACGAGATACACAAGACGCAGAGCTCGTGGATTGTTTGCGACGAGCAGCTTCAGTCGGAGCTGAGGGTTTCCATAACGGCGGTGGTGATTCCAGCGTACAGGGCGTTCTTGGGGAGGTTTTCGCAGTATTTGACCGCAGGGAGACAAACTGAGAAGTATATTAAATACCAGCCCGACGATATAGAGACTTACATTGATGAGCTATTTGATGGGAACCACCCTAGAAGGAAATCATGA	2031	0.5076	MENLAENPDKEEQNKTHETPRSPLPDPREADSDDVKPDDDSEAVAVTEGETKDEVVKVPESPPPTLEKVSADIDSWMVTLQQNENFQEASLQIPDCIDKFLYLVEENIVRYDTGEAKAKWGEIPEQDSSFLESVNRIQKLVKLLSQSESSSEETNQRKDSLVNRIGDIKQQAMSYLEEEFRLLMEQSRNQGESDSGGHDPKGKQVEPDHCQLLDPERTGADTDFPGYPEETVTSLNKIAKEMISAGYESECCQVYIISRRQAFEERLRKLGFEKISIDEIQKMHWESLEREIPTWITTFKECTSVYFAGERKLAEAVFAEHPSIGASLYSNLARGVVIQLLNFAEGVALTKRSAEKLFKFLDMCETLRDVISAFDDLFPEDSGSELKMETTSAKSRLGEAAICIFCDLENSIKSETGKTPVPGGAVHPLTRYVMNYLPYACEYKDTLEQVFREHSKIERADSTSRPHPEGEQGNAQNDGEDKEESPFAAQVMRVMELLDSSLEGKAKLYRDGSLSCIFMMNNGRYILQKIKGSSEIYQVLGNTWCRKRSSDLRTYHKNYQRETWSKILTCLSHEGLSVNGKVQKPVLKERFKSFNTMLDEIHKTQSSWIVCDEQLQSELRVSITAVVIPAYRAFLGRFSQYLTAGRQTEKYIKYQPDDIETYIDELFDGNHPRRKS	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g2076	676	Pfam	Exo70 exocyst complex subunit	295	665	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Glsi12g2076	676	FunFam	Exocyst subunit Exo70 family protein	113	675	-	-
	Glsi12g2076	676	Gene3D	Exocyst complex component Exo70	113	675	-	-
	Glsi12g2076	676	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	105	669	IPR004140	GO:0000145\|GO:0006887
	Glsi12g2076	676	MobiDBLite	consensus disorder prediction	1	68	-	-
	Glsi12g2076	676	MobiDBLite	consensus disorder prediction	192	208	-	-
	Glsi12g2076	676	SUPERFAMILY	Cullin repeat-like	126	668	IPR016159	-
	Glsi12g2076	676	MobiDBLite	consensus disorder prediction	1	57	-	-
	Glsi12g2076	676	MobiDBLite	consensus disorder prediction	457	485	-	-
	Glsi12g2076	676	MobiDBLite	consensus disorder prediction	187	208	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g2076	Glsi-ChrGlsi12	35946627	35948657	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g2076	30	670	EXO70 exocyst subunit family	AT5G13990	52.711	0.0	669