Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2062 ATGCTAATGCCCCCCATCACCTGTCAGGAACAGGATCTCTACCCTCTACTACTCAACAAGCGGGGACCCACCGATCTATACACTATATCACTGATACCTGAACGGAAAACAATCCCCAAGGTAGTGAAACTGGCAGTTGAAGTTGCCGGCATATCAGGCTGGTCAAATCCCAGTACAGTCACAAAGAGGTCATCTTCTTCAATCAAAGAGGACCCATCTTTTTTTTCCTTTTCCTTGTCTGCCCTGTTCATGGATCCCAAGGGCTCAAAGCAGCCACAGGAGGTACCCAACTTCTTGAGTCTCCCACAGCCACAAGCGAATATGGGAGAGAACAAACCAGCAGAAATCAAGGATTTCCAGATTGCGATTGCGGATAAAGAAGAGAGCAAGAAGCAGTTGGCGCCCAAGCGGAGTTCAAACAAGGACAGACACACCAAGGTCGAAGGCAGGGGAAGGAGGATAAGGATGCCTGCTCTGTGTGCAGCAAGAATTTTTCAGTTGACCAGAGAGCTGGGCCACAAATCTGATGGGGAAACCATACAGTGGCTTTTGCAGCAGGCGGAGCCGTCGATAATCGCGGCTACTGGAACTGGCACCATACCCGCATCAGCTTTAACTGCGGCTGGTGGCTCTGTTTCACAACAGGGGACCTCTCTCTCAGCTGGATTGCATCAAAAAATTGATGAATTTGGCGGGTCCAATATTGGGTCAGGCAGTAGGACCGGTTGGGCAATGGTTGGTGGAAATCTGGGGAGACCCCATATGGCTGCTGGTCTATGGCCCCCTGTCAGTGGATTTGGGTTTCAATCATCATCTGGTCCATCCACAACCAGTTTAGGCAGTGAGAGTTCAAATTACCTGCAAAAGATTGGGTTCCCTGGGTTTGACTTGCCAGCCGCTAACATGGGTCCTATGAGTTTCACCTCAATTCTGGGTGGGAGTAACCAGCAAATGCCTGGTTTGGAGCTGGGACTGTCCCAAGATGGGCACATCGGGGTTTTGAACCCACAAGCCTTGAGCCAGATTTATCAGCAGATGGGTCAAGCCAGAGTACATCAGCAACATCATCAGCACCAGCAGCCTCCTGCCAAGGATGATTCTCAAGGGTCGGGACAGTAG 1119 0.5067 MLMPPITCQEQDLYPLLLNKRGPTDLYTISLIPERKTIPKVVKLAVEVAGISGWSNPSTVTKRSSSSIKEDPSFFSFSLSALFMDPKGSKQPQEVPNFLSLPQPQANMGENKPAEIKDFQIAIADKEESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALTAAGGSVSQQGTSLSAGLHQKIDEFGGSNIGSGSRTGWAMVGGNLGRPHMAAGLWPPVSGFGFQSSSGPSTTSLGSESSNYLQKIGFPGFDLPAANMGPMSFTSILGGSNQQMPGLELGLSQDGHIGVLNPQALSQIYQQMGQARVHQQHHQHQQPPAKDDSQGSGQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2062 372 MobiDBLite consensus disorder prediction 127 149 - -
Glsi12g2062 372 MobiDBLite consensus disorder prediction 345 372 - -
Glsi12g2062 372 ProSiteProfiles TCP domain profile. 140 194 IPR017887 -
Glsi12g2062 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 93 220 IPR005333 GO:0003700
Glsi12g2062 372 Pfam TCP family transcription factor 139 224 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2062 Glsi-ChrGlsi12 35852702 35854262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2062 84 372 TCP Transcription Factor Family AT3G27010 57.099 2.74e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi12g2062 TCP 1.1e-30 No_clan