Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2046 ATGGGTGGATTTCAGGAGAGGTTTAGAACCTTCTACAGGAACAGATGGCTTGTGTTTGTCGCTGCAATGTGGCTGCAGTCATGGGCAGGTATTGGGTATTTGTTTGGGAGCATTTCGCCTGTCCTAAAGAGATCTTTGAACTATAATCAGAGGCAGCTTTCCAGGTTGGGGGTGGCCAAAGACCTTGGTGATTGTGTTGGGTTCGTGACGGGCGTTTTGTGCGAGATATTGCCTTTATGGGGTGCTTTGCTCGTTGGTGCTATGTTGAACTTTGTTGGTTATGGTTGGGTTTGGTTGATTGTCACTGGTCGAGCTCCGACTCTACCTTTATGGGCTATGTGCGTTCTTATATTTGTGGGTACAAATGGTGAAACCTACTTCAACACAGTTAGTCTGGTGTCTTGCGTGCAAAACTTCCCAAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGTTTTGCTGGGTTGAGCGGTGCAATCTTGACTCAAATATATGCTTTGATCCATTCCCCTGACCATGCATCTCTTCTATTCATGGTTGCGGTTGGTCCATCCTTGGTAGGAATTGGTCTGATGTTCATTGTTAGACCAGTTGGAGGTCACAAACAAGTTCGGCCATCAGATGGCACAAGCTTCACATTTGTCTACAGTGTGTGTCTCCTATTGGCAGCTTATTTGATGGGGGTCATGCTTGTCCAAGATCTAGTAGCCTTGAACCATGACATTATCATTATATTTACAGTGATCTTGTTCATTATCCTCCTGATCCCAATTGTCATTCCTGTCTCAATGAGTATTTTCCCGGAGCAAAGAGCTATAGAGGAGGAGGCACTTCTTCCTGAACCACGGAATCAAGGAATGGGAAATTCTCAACACAGTGCTGATGAAGTAATATTTAGTGAGGTGGAAGATGAAAAACCTGAGGAGGTGGACTTTCTTCCTGCAACAGAAAGGCAGAAACGTATAGCACAATTACAATCAAAACTAGTGCAAGCAGCAGCAGAAGGGGCAGTGAGGGTCAAGAGGAGGAGAGGACCACGCAGAGGGGAGGACTTTACCTTGACACAAGCTTTGATTAAAGCAGACTTTTGGCTTCTTTTCCTGTCCCTTCTGTTGGGTTCTGGATCCGGGTTGACTGTTATAGACAATATGGGTCAAATGAGCCAGTCTCTAGGATATAACAATACACATATATTTGTGTCCATGATCAGTATATGGAATTTTCTTGGCCGTGTTGGAGGGGGTTACATCTCTGAGGTTGTAGTGAGGGACCATGCCTATCCAAGGCCAATTGCATTGGCTGTATTTCAGCTTGTTATGGCGGTTGGCCATGTCTTCCTTGCTATGGGATGGCCAGGAGCAATGTATGTTAGTACTCTGCTGGTTGGAGTTGGTTATGGGGCCCACTGGGCAATTGTTCCAGCTGCTGCCTCTGAGTTGTTTGGTCTGAGAAACTTCGGAGCTTTGTACAATTTTCTTACTCTGGCAAATCCGTCAGGAACTCTAGTGTTCTCTAGCTTAATTGCCAGCAGAATCTATGATTATGAAGCAGAGAAACAAGCTCAGGAGGGACATCAACATCAGCAGATTATAGGGTCATTTTTGTCGCGGGTTCTTAATCATAATGAACCTCCAAAGTGTGAAGGTGCCATATGCTTTTTCCTGACTGGTACAATCATGGCAGTATTCTGCATTGTTGCAGCAGTCTTAAGCATGATTCTCGTACACCGAACCAAGATTGTTTATGACAACCTATATGGAAAGTCTTCTACTAGTAGACTTCGATAA 1788 0.4491 MGGFQERFRTFYRNRWLVFVAAMWLQSWAGIGYLFGSISPVLKRSLNYNQRQLSRLGVAKDLGDCVGFVTGVLCEILPLWGALLVGAMLNFVGYGWVWLIVTGRAPTLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALIHSPDHASLLFMVAVGPSLVGIGLMFIVRPVGGHKQVRPSDGTSFTFVYSVCLLLAAYLMGVMLVQDLVALNHDIIIIFTVILFIILLIPIVIPVSMSIFPEQRAIEEEALLPEPRNQGMGNSQHSADEVIFSEVEDEKPEEVDFLPATERQKRIAQLQSKLVQAAAEGAVRVKRRRGPRRGEDFTLTQALIKADFWLLFLSLLLGSGSGLTVIDNMGQMSQSLGYNNTHIFVSMISIWNFLGRVGGGYISEVVVRDHAYPRPIALAVFQLVMAVGHVFLAMGWPGAMYVSTLLVGVGYGAHWAIVPAAASELFGLRNFGALYNFLTLANPSGTLVFSSLIASRIYDYEAEKQAQEGHQHQQIIGSFLSRVLNHNEPPKCEGAICFFLTGTIMAVFCIVAAVLSMILVHRTKIVYDNLYGKSSTSRLR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2046 595 SUPERFAMILY MFS general substrate transporter 211 579 IPR036259 -
Glsi12g2046 595 CDD MFS_Mch1p_like 15 568 - -
Glsi12g2046 595 Pfam Nodulin-like 15 262 IPR010658 -
Glsi12g2046 595 Gene3D MFS general substrate transporter like domains 312 521 IPR036259 -
Glsi12g2046 595 Coils Coil 315 335 - -
Glsi12g2046 595 SUPERFAMILY MFS general substrate transporter 7 200 IPR036259 -
Glsi12g2046 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2046 Glsi-ChrGlsi12 35756476 35759509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2046 5 591 Nodulin-like Gene Family AT5G14120 69.492 0.0 820