Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g2032 ATGATGCCCCTCCTTTCTCTCCCATTCCTTTTAATTTTCTACATAACACTAAGTGAGCTCCGGCGCCGAGTTGGAGCTTTCTCCGGCCACGGCCCACCAACCTATCCTCTCATCGGATGCCTCGTATCCTTTTACAGGAACCGGAAGCGCCTCTTGGATTGGTACACTGAGCTGCTGGCTCACTCTCCCACCAACACCATCGTCGTCCAGCGGCTAGGTGCACGTAGGACCATTGTCACTGCAAACCCGCAAAACGTCGAGTACATCCTCAAAACCAACTTCCATAACTTCCCCAAAGGCAAGCCCTTCACTGAGATCCTCGGTGATTTTCTTGGCCATGGCATCTTCAACGTCGATGGTCAGCTTTGGCATACCCAACGTAAATTAGCCAGCCATCACTTCACTGCCAGGTCCTTGAGGAAATTTTTCAAGCACACGCTAGAGGAAGAAGTGGGTAAGCGCCTCTTGCCCGTGCTCGACTCGTTGTCCACGGAAAACCAAGTGGTGGACTTGCAAGATTTGCTGGGAAGATTCTCCTTCAATGTCATTTGTAAAGTCACCCTAGGGATCAATAGGTGTTCCCTGGACCCTTCTTCTCCCATTTCACCTCTTGCAAGAGCTTTTGATATAGCCTCAGAGATATCTGCAAGACGTGGAGCAGCACCCTTGTTCATGATCTGGAAGATGAAGAGATGGCTCGGAGTTGGATCTGAACGGAGGCTGAGAGAGGCTGTTGAAGCAGTTCAGACTCATGTGATGGAAATGATTCACGAGAGGAAGAAGAAGATGTATGCAAGAGAGGAAACTTGCAGTGAAGATCTCCTGTCACGGCTTATATGTGCAGGTCAAGAAGAAGAGGTTATTAGAGACATGGTGATAAGCTTTATAATGGCAGGGAGGGACACTACATCAGCAGCAATGACATGGTTCTTCTGGTTGATTTCCCAGTATCCAGCTATGGGGAATCAGGTCGTGAAAGAGACAGAACTTAAGGCAGAAAAAGGATTAGATTATGAATCATTGAAGAATCTCAAGTTGTTAAAGGCATGCCTCTGTGAGTCCATGAGGCTGTACCCACCTGTGGCCTGGGATTCTAAGCATGCCATAGCCAATGATATGCTGCCGGACGGTACCCTGGTGAAGGCAGGAGATAGAGTCACATATTTTCCATATGGAATGGGGAGAATGGAAGCATTGTGGGGAAAGGACTGGTTCGAGTTTAGACCAGATCGCTGGTTTATTAAACCAGAAAGAAATAGTAAAAGGACTAAGGTTTCACCCTCCGAGTTTCCAATATTTCAGGCAGGTCCGAGAGTATGTCTTGGGAAGGAGATGGCTTTTATTCAGATGAAGTATGTGGTGGCTTCAATCCTTAGGCGATTCAAATTCAGACCCGTCAGCTCAGACAAGCCTATATTCGTGCCACTTCTTACGGCACACATGGCCGGCGGGCTAAAGGTGTTTGTTTGCAAGAGGGAGAAACTCAAATAG 1491 0.4789 MMPLLSLPFLLIFYITLSELRRRVGAFSGHGPPTYPLIGCLVSFYRNRKRLLDWYTELLAHSPTNTIVVQRLGARRTIVTANPQNVEYILKTNFHNFPKGKPFTEILGDFLGHGIFNVDGQLWHTQRKLASHHFTARSLRKFFKHTLEEEVGKRLLPVLDSLSTENQVVDLQDLLGRFSFNVICKVTLGINRCSLDPSSPISPLARAFDIASEISARRGAAPLFMIWKMKRWLGVGSERRLREAVEAVQTHVMEMIHERKKKMYAREETCSEDLLSRLICAGQEEEVIRDMVISFIMAGRDTTSAAMTWFFWLISQYPAMGNQVVKETELKAEKGLDYESLKNLKLLKACLCESMRLYPPVAWDSKHAIANDMLPDGTLVKAGDRVTYFPYGMGRMEALWGKDWFEFRPDRWFIKPERNSKRTKVSPSEFPIFQAGPRVCLGKEMAFIQMKYVVASILRRFKFRPVSSDKPIFVPLLTAHMAGGLKVFVCKREKLK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g2032 496 Pfam Cytochrome P450 31 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PANTHER CYTOCHROME P450 20 487 - -
Glsi12g2032 496 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 Gene3D Cytochrome P450 28 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 SUPERFAMILY Cytochrome P450 31 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 CDD CYP86A 66 485 - -
Glsi12g2032 496 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g2032 496 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g2032 Glsi-ChrGlsi12 35701262 35702752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g2032 32 493 Cytochrome P450 AT3G01900 61.456 0.0 596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2032 12 35701262 35702752 Glsi12g2032 12 35701262 35702752 ECH