Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1965 ATGGTTGAGTTTTTATCCATCATCTCAGCTTTTCTCTCTGGATTGGTCTTGACTTTGTTTCTCAAATATCTGAGAAAACAGGAGAGCCCAAAAAGCTTACCTCGTGGAAGCATGGGGTGGCCCTTTTGTGGGGAAACTCTTGGCTTCCTCAAACCCCATGAATCAAACTCGTTAGGAAGCTTCTTACAAGAACATTGTTCTAGGTACGGCAAAGTTTTCAAGTCGCATCTGTTTGGTTCTCCTACCATAGTTTCCTGCGACTATGAGCTCAACATGTTTATTCTTCAGAATGAAGGGAAATTATTCCCGGTTGATTACCCCAGGGTAATACACAACATTCTCGGAAAGTTTGCTCTCCTTCTTGTCACAGGGGACCTTCATAGGAAGCTGAGAAGCACTGTTGTCAGTTTTGTTGGTGCTTCTAAGTCAGAATCTAAGTTCCTTCACTGTGTAGAAATGCTTGCGCTCTCAAGAATGAAATCATGGGAGAACTGTAAACAAGTTGCTTTCTATAAAGAAGCTAAAAGGTTTTCAATCTGTGTTATGCTGAAGCACCTGCTGAACATTAATCCGGACGAGCCTCTAGCCTCCAAGATTTTAGAGAACTTTGAGAACTACATCAAAGGCTTCGTTTCTTTGCCACTAAATATTCCATGGACTACATATTCCAACGCTGTGAAGGCCAGGGTAAGACTCTCGTGCATTGTCAAAGAAATTATAATAGAACGGCGGAAAGGTAACGTGGGACCTGTGGACCTCTTAAATGTGATTTTGTCAAAGCAGAACCTATGTGATGAAGAGATGGTGAGCATTGTATTAGACCTCTTGTTTGGGGGTTATGAGACAACTGCAAAACTCATGTCCTTGATTGTCTATTTCCTTGGCCAAGCACCTAATGCGTTAGAAAGGCTAAAGGAAGAACACCAATTGGTGAGGAAAAGAAAAAAAGAGGGGGAACCACTGAGCTGGGAAGACTATAAACAAATGGAGTTCACTGTAAATGTTATAAATGAAGCAATGAGATGCGGGAATGTAGTCAAATTTGTACACAGGAAAGCTGTTCAAGATGTCAAATTCAAAGAGTTTGTGATACCCGCAGGATGGAAGGTTCTACCTGTTTTGTCTGCTGGACATTTGGATCCCATTCTTCATGAGAATCCTTTGGAATTCAATCCCTTCAGATGGAATGACATTTCGACGAGCAAGAAAGTGGCGCCTTTTGGTGGTGGTCCACGACTCTGTCCAGGGGCGGATCTAGCTAAAGTGGAGATAGCTTTCTTCCTTCATTATCTTGTCCTTAATTATAGGTGGAAGATCGAACCAGATGACTACCCTCTTGCTTTTCCTTACGTGGAGTTCACCAGAGGGCTGCTATTGGAACTTCAACCCACAGAAAAATTAGACTCGAATTCAATGTCAATTCGAATTTTAAGTATGTCTAAGTCGGCGGTAGATCTTCCTCCCAAGGGTGGATTTAGTTTTGATCTATGTAGAAGAAATGACATGCTTGAAAAGAAGGGTCTTAAGCCGCAGTCTTTTCTCAAGACAGGAACTACTATTGTTGGTTTGATTTTTCAGGATGGCGTCATTCTTGGAGCAGATACTAGGGCCACTGAAGGACCCATAGTTGCTGATAAAAACTGTGAAAAAATTCATTACATGGCACCCAACATATATTGCTGTGGAGCAGGTACTGCTGCTGATACAGAGGCAGTAACAGACATGGTCAGCTCACAGCTACAGTTGCATCGCTACCATACTGGTCGAGAATCAAGAGTTGTTACAGCACTGACCCTTCTGAAGACACATCTTTTCAATTACCAAGGTTATGTCCAAGCTGCTTTGGTACTTGGTGGGGTTGATGTCACTGGACCTCATTTGCATACTATTTATCCACATGGTTCAACTGACTCACTCCCCTTTGCGACAATGGGTTCAGGTTCACTTGCTGCAATGTCTCTATTTGAGTCTAAATACAAGGAAGGCTTGACGAGGGATGAAGGGATACAGCTTGTGTGTGAGGCAATAAGTGCTGGTATATTTAATGATTTGGGAAGTGGAAGTAATGTAGACGTTTGTGTGATAACTAAGGGACATAAGGACTATCTTAGGAATCACCTCCAGCCAAATCCTCGTACATATATCAATCCGAAAGGCTTTACTTTCCCCAAAAAGACCGAGGTTCTCTTAACAAAGATTACCCCCTTGAAGGAGAAGGTGGAAGTGATAGAAGGAGGAGATGCTATGGAAGAGTAG 2256 0.4246 MVEFLSIISAFLSGLVLTLFLKYLRKQESPKSLPRGSMGWPFCGETLGFLKPHESNSLGSFLQEHCSRYGKVFKSHLFGSPTIVSCDYELNMFILQNEGKLFPVDYPRVIHNILGKFALLLVTGDLHRKLRSTVVSFVGASKSESKFLHCVEMLALSRMKSWENCKQVAFYKEAKRFSICVMLKHLLNINPDEPLASKILENFENYIKGFVSLPLNIPWTTYSNAVKARVRLSCIVKEIIIERRKGNVGPVDLLNVILSKQNLCDEEMVSIVLDLLFGGYETTAKLMSLIVYFLGQAPNALERLKEEHQLVRKRKKEGEPLSWEDYKQMEFTVNVINEAMRCGNVVKFVHRKAVQDVKFKEFVIPAGWKVLPVLSAGHLDPILHENPLEFNPFRWNDISTSKKVAPFGGGPRLCPGADLAKVEIAFFLHYLVLNYRWKIEPDDYPLAFPYVEFTRGLLLELQPTEKLDSNSMSIRILSMSKSAVDLPPKGGFSFDLCRRNDMLEKKGLKPQSFLKTGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKTHLFNYQGYVQAALVLGGVDVTGPHLHTIYPHGSTDSLPFATMGSGSLAAMSLFESKYKEGLTRDEGIQLVCEAISAGIFNDLGSGSNVDVCVITKGHKDYLRNHLQPNPRTYINPKGFTFPKKTEVLLTKITPLKEKVEVIEGGDAMEE 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1965 751 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Glsi12g1965 751 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 CDD CYP90-like 65 463 - -
Glsi12g1965 751 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 490 705 IPR029055 -
Glsi12g1965 751 Pfam Cytochrome P450 34 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 FunFam Cytochrome P450 724B1 28 462 - -
Glsi12g1965 751 Gene3D Cytochrome P450 24 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 ProSiteProfiles Proteasome beta-type subunit profile. 517 695 IPR023333 -
Glsi12g1965 751 PANTHER CYTOCHROME P450 26 30 441 - -
Glsi12g1965 751 FunFam Proteasome subunit beta type-2 518 750 - -
Glsi12g1965 751 Pfam Proteasome subunit 515 695 IPR001353 GO:0005839|GO:0051603
Glsi12g1965 751 CDD proteasome_beta_type_7 518 706 - -
Glsi12g1965 751 SUPERFAMILY Cytochrome P450 29 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g1965 751 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 518 749 IPR029055 -
Glsi12g1965 751 ProSitePatterns Proteasome beta-type subunits signature. 521 568 IPR016050 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1965 Glsi-ChrGlsi12 35291603 35301856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1965 38 359 Cytochrome P450 AT5G14400 54.878 1.77e-131 391