Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1958 ATGGCTCCGTGGACGAAGTCTGCGCAGGTTATGGTGCTAACGATGCTTGTTGCAACGTTGATGAAGTGCGGCGAAGCCATATCGTTAATTCCTCCCAAAGCAACGGTGCAAATAATCAACAATTTGGCACCAGCTCAGAACTTGACTCTTCATTGCAAATCCAAGCAAGATGATATTGGATTTCACACAATCGGACATGGAGAAAGCTACGAGTTCAGTTTCAGGCCGAACGCGGTGGCCGTGATAACACTGTTTTTCTGCAGTTTTACGTGGCCGGCCGACACTTCGCTTCACTACTTTGACATTTACGTTCAGGAGCGAGACGAGACTACTTGCGTCTTCTGCTCTTGGAAAATATGGAAAGAAGGTGCATGTAAATACGATCCCCATGTGCATGCCTACGTTCAGTGCTATGACTGGAACAATTCTATTACCCATCTCTGA 444 0.4662 MAPWTKSAQVMVLTMLVATLMKCGEAISLIPPKATVQIINNLAPAQNLTLHCKSKQDDIGFHTIGHGESYEFSFRPNAVAVITLFFCSFTWPADTSLHYFDIYVQERDETTCVFCSWKIWKEGACKYDPHVHAYVQCYDWNNSITHL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1958 147 Pfam Plant self-incompatibility protein S1 35 140 IPR010264 -
Glsi12g1958 147 PANTHER - 31 130 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1958 Glsi-ChrGlsi12 35265186 35265629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1958 15 142 Carbohydrate Esterase AT3G16970 39.286 2.79e-26 94.7