Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi12g1952 | ATGGCGAAATCTTTACCTCTAACCCACGTGTCGTTCCTCTTATCCCGTTCCAGAGTTATGGCCTCTGCAAGACTATTCTATCAAAGGCTTCCCCCTTCAAAATTCACATCCTTTGGCAAAATAAACACTCTCTCTCTATCGCCTTCCGTACAAACTTTTTCCACCACATCCACCGCATACCCACTTCAGTACGAGATGATTATCAACCGTCCAGCTAAGTCTGAGCTTGCCCATTCTCGCCGTCGACCTGTTCGACATAATGAATCCAATTCAGAGAGCGTCCCCGAATCGAATTTACCAGAAGAACCGGTTTCAGAATTAGGATTAGATAGTTGGGTCGATCGGAAACTGGCTTCTGAAAAAGAAACTGATCAACCCAGTCCCGAAGAAGTAGAGCTTGACAAGGCTAAGAGAAAGTATTACAGTAAACGGAGGAAGAGGATGTATGGATCAGACTCTGACGAAGAAAATAGGCGACCTGAAGAGAAATTCGTGGAACTGAAGCCTGAGGTGGTGGAGCTTCCTACATTGCACAAGAGGGAGGAAGAATTGTATTTCTACGATACGTTTTCTTACCCGTGGGAAAAGGAGAAGCATTATAGGATGGTTTATCAGTTAGAGAAAAAATACTTTCCTGACCAGTGTCTTGATAAAGCGTTCCTTGAACCGGGAGAATCAAATGCGAAAGTGAACGTAAATGCGGATGTAAAAAGCAAGGTGAAGGAAAAGAAGAAAGTCAGAGGTGATAGAAGGGAGAAAAAATATGAGGTTGGTGATGAAAGAGATGATGGTAAATTGCTGTTCTTCGAGGAGAAACAAGAAGAAATGAATAATAAAGAATTGGTTAAGGATGCAAGAAAAGATCTAACGGAAAAGAAGGTCGAGGAGTTCTTCAAGTGTTTGAAAAAAGTCCCGAACAAGGATGTTGATGTTGGTAATGCAGAGCCATATCTTGTGTCAAGGAGTACTGGGCTACCTCCCAGATGGGAGGATCCGCATGGCACCGTACTTTTGGTGAATAAACCCAAAGGATGGACTTCATTTACAGTTTGTGGAAAGCTGCGACGCCTAGTCAAAGTGAAAAAGGTAGGTCATGCTGGAACTCTTGATCCTATGGCTACGGGTTTATTGATTGTTTGTGTTGGTAAAGCAACAAAACTGGTAGAAAGATATCAAGGGATGATTAAGGGTTATAGTGGGGTTTTCCGCCTAGGGGAGGCTACTTCAACATGGGACGCTGATTCAGCCGTGATTCAACGTGAGCCATGGGAGCACATCAAAGACGAGGACATAAAGAGAACTGCTGCTACCTTTTGTGGGGAGATTTGGCAAGTTCCTCCAATGTTCTCTGCTATTAAAGTTGGAGGTGAGAAGATGTACGATAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCTCGACGAATTTCAATTTTCCAGTTTGACATAGAGCGTAGTTTAGATGACAGACAAAATTTGATTTTTAGGGTAACATGTTCCAAAGGGACATATATTCGGTCACTGTGTGCAGATTTTGGGAAGGCTCTTGGCAGTTGTGCCCATTTAACTGCTCTCCGAAGAGATTCAATTGGGAAATATTCAGCAGATGATGCATGGGACTTTGACGAACTGGAAGAGGCTATTTCAAAAAGTTATTTCTAA | 1662 | 0.4284 | MAKSLPLTHVSFLLSRSRVMASARLFYQRLPPSKFTSFGKINTLSLSPSVQTFSTTSTAYPLQYEMIINRPAKSELAHSRRRPVRHNESNSESVPESNLPEEPVSELGLDSWVDRKLASEKETDQPSPEEVELDKAKRKYYSKRRKRMYGSDSDEENRRPEEKFVELKPEVVELPTLHKREEELYFYDTFSYPWEKEKHYRMVYQLEKKYFPDQCLDKAFLEPGESNAKVNVNADVKSKVKEKKKVRGDRREKKYEVGDERDDGKLLFFEEKQEEMNNKELVKDARKDLTEKKVEEFFKCLKKVPNKDVDVGNAEPYLVSRSTGLPPRWEDPHGTVLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVERYQGMIKGYSGVFRLGEATSTWDADSAVIQREPWEHIKDEDIKRTAATFCGEIWQVPPMFSAIKVGGEKMYDKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGKYSADDAWDFDELEEAISKSYF | 553 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi12g1952 | 553 | Hamap | tRNA pseudouridine synthase B [truB]. | 333 | 553 | IPR014780 | GO:0001522|GO:0003723|GO:0009451|GO:0009982 | |
| Glsi12g1952 | 553 | MobiDBLite | consensus disorder prediction | 117 | 136 | - | - | |
| Glsi12g1952 | 553 | FunFam | tRNA pseudouridine synthase B | 330 | 552 | - | - | |
| Glsi12g1952 | 553 | MobiDBLite | consensus disorder prediction | 74 | 105 | - | - | |
| Glsi12g1952 | 553 | Pfam | tRNA pseudouridylate synthase B C-terminal domain | 506 | 549 | IPR032819 | - | |
| Glsi12g1952 | 553 | SUPERFAMILY | Pseudouridine synthase | 335 | 548 | IPR020103 | GO:0001522|GO:0003723|GO:0009451|GO:0009982 | |
| Glsi12g1952 | 553 | Coils | Coil | 272 | 292 | - | - | |
| Glsi12g1952 | 553 | Gene3D | Pseudouridine synthase | 328 | 552 | - | - | |
| Glsi12g1952 | 553 | NCBIfam | tRNA pseudouridine(55) synthase TruB | 335 | 544 | IPR014780 | GO:0001522|GO:0003723|GO:0009451|GO:0009982 | |
| Glsi12g1952 | 553 | Pfam | TruB family pseudouridylate synthase (N terminal domain) | 355 | 505 | IPR002501 | GO:0006396 |
Showing 1 to 10 of 13 entries
Duplication type information
Functional genes information