Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1928 ATGGCAAGCTCTTCTAGCTACTCAAATTCTCCTTGTGCTGCCTGCAAGTTTCTGAGAAGGAAATGCATGCCAGACTGCATATTCGCCCCATATTTTCCACCCGAGGAGCCTCAAAAGTTTGCCAATGTTCACAAAATCTTTGGAGCAAGCAACGTGAGTAAACTCCTGAATGAAGTTCAACCCCACCAAAGAGAGGATGCAGTGAACTCTCTGGCTTATGAAGCTGAAGCTCGGATAAAAGACCCCGTCTATGGCTGTGTAGGGGCCATTTCAGTCCTCCAAAGGCAAGTCATTAGGCTACAAAAGGAACTTGATGCCACTAATGCAGATTTGATCCGCTATACCTGCAACGAAATGCCACCTCTAGCTGCAAGTAGAATGGGTGAGGGAGGTTCATCTGATCTTGGTCAATCTCCTGGGTTTTATTATCCATCTCCTTGGAACAATGATCCTTGA 456 0.4605 MASSSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEMPPLAASRMGEGGSSDLGQSPGFYYPSPWNNDP 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1928 151 Coils Coil 90 110 - -
Glsi12g1928 151 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Glsi12g1928 151 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Glsi12g1928 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 117 - -
Glsi12g1928 151 MobiDBLite consensus disorder prediction 125 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1928 Glsi-ChrGlsi12 35060145 35060600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1928 5 114 AS2 family AT3G27650 85.455 3.80e-70 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi12g1928 LOB 6.9e-43 No_clan