Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1917 ATGAATACGACGCCGTTCATGGACAAGCAGATAATGGATCTAACTCAAGGATCGTCTCAGGGCAAGGATTTCATCGACCTCATGAGCCATCCTAAAGAGGAACAAGAAGAAGAAACCGAAGCTCGCCGTGTCGGTGGCAATGGGGTTAAGAAGGAGGATATCGTGCCCAGCTATGATTTCCAGCCGATTCGCCCACTCGGAACTTCGACTCAGTCTTCCAATTACGATTCTACCCCAAACCTCGGAGCCATTTCTAGGGCTTGGAACTCTGACTCTAAGTCTAACTCTTCCACTCCAATTATCAGAAATTACAGTTCTCTGGATTCTATTGAACCTGCAAAAGTCATTGTAGAAAAGGACCAAAATGCCTTTGATGCTACTATTTTGTCTGAGATTGATCGAACCATGAAGAAACATATGGAAAATTTGCTTCATGTTCTGGAAGGTGTTAGTGCAAGGTTAACACAGCTAGAGAGCAGAACCCACCATCTTGAGAATTCTGTGGATGATTTGAAGGTATCTGTTGGAAACAATCATGGCAGCACTGATGGAAAAATGAGGCAGCTGGAGAATATCCTTAGAGAGGTACAAACAGGGGTACAGGTCTTAAAGGATAAGCAACATATGGTGGAAACTCAGCTGCAGCTGACAAAGCTACAAGTGTCCAAGGTGGACCAACAATCAGAAACTCAGACTAGTATGATTGCAGATCCTGTGCAGCAAGCTGCATCTGCTCCCCAGCAATCTCTACAACAGCTTCCTTCCCCTGTTAATCTTCCGCAATCAATTCCTGCAGTCCCTCACCCTAATGCTCCTCCTCAACCTCTGCCCCAGCAGGGTTTGCCACCTCCAGTTCAGCTTCCAAATCAATTTTCTCAGAACCAAATCCCGTCTGTTCCTCAGCGAGAACCATACTTCCAACCACCTCAATCTCATGAAACCCCAAATCAGCAATACCAACTGCCTTTAACTCAGCAGCCGCATCCTCCTACTGGGGCACCTCCACAGCAACAATATCAACAGACCCCTCAACCCCAGTACCCTCAGCCTGCACCTCATCCACCTCAACAGCAGCCAACGCCTTCACCTGTTATTCCCCCTCAACTACAACCTTCGCTGGGTCACCATGTGGAAGAGACATCTTATATTCCTTCTCAGAATTTCCCACCCAATCTCCGCCAGTCATCATCTCAGCTACCCAGTGGACTTCCTCCCTCCCAGCAATTCTATGGAGCACCGTCCCATGTGTATGAACCACCATCGAGTAGATCTGGTTCAGGTTTTTCTACTGGATATGGTGCACCATCTGGGCCTGCCGAGCCATATCATTATGGTGGATCACCTCAGTATGGTGCCACTTCAGCACAAAAACCACAACTTCCTACTCCTTCCGTGGCCTCAAGTGGTGGAAGTAGCTACCCACAGCTTCCAACTGCTCGGGTACTGCCGCATGCATTGCCTACTGCTTCTGGGGCAGGTGGCGGTTCAGGTTCCGCTGGAACTGGAAACCGGGTTCCCATTGATGACGTGGTTGACAAATTGGCAATCATGGGATTCCCTAGAGACCATGTGAGGGCAACAATTCGGAAGCTAACAGATAATGGTCAATCAGTTGACCTTAATATAGTGCTGGATAAGCTTATGAATGAAGGTGATATTCAGCCAAGAGGTTGGTATGGTCGGTAG 1686 0.4798 MNTTPFMDKQIMDLTQGSSQGKDFIDLMSHPKEEQEEETEARRVGGNGVKKEDIVPSYDFQPIRPLGTSTQSSNYDSTPNLGAISRAWNSDSKSNSSTPIIRNYSSLDSIEPAKVIVEKDQNAFDATILSEIDRTMKKHMENLLHVLEGVSARLTQLESRTHHLENSVDDLKVSVGNNHGSTDGKMRQLENILREVQTGVQVLKDKQHMVETQLQLTKLQVSKVDQQSETQTSMIADPVQQAASAPQQSLQQLPSPVNLPQSIPAVPHPNAPPQPLPQQGLPPPVQLPNQFSQNQIPSVPQREPYFQPPQSHETPNQQYQLPLTQQPHPPTGAPPQQQYQQTPQPQYPQPAPHPPQQQPTPSPVIPPQLQPSLGHHVEETSYIPSQNFPPNLRQSSSQLPSGLPPSQQFYGAPSHVYEPPSSRSGSGFSTGYGAPSGPAEPYHYGGSPQYGATSAQKPQLPTPSVASSGGSSYPQLPTARVLPHALPTASGAGGGSGSAGTGNRVPIDDVVDKLAIMGFPRDHVRATIRKLTDNGQSVDLNIVLDKLMNEGDIQPRGWYGR 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1917 561 MobiDBLite consensus disorder prediction 238 259 - -
Glsi12g1917 561 Coils Coil 186 206 - -
Glsi12g1917 561 Coils Coil 140 160 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 285 326 - -
Glsi12g1917 561 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 559 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 26 49 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 238 477 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 449 475 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 63 77 - -
Glsi12g1917 561 Pfam UBA-like domain (DUF1421) 507 550 IPR010820 -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 485 504 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 1 77 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 260 284 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 1 23 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 379 408 - -
Glsi12g1917 561 MobiDBLite consensus disorder prediction 345 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1917 Glsi-ChrGlsi12 34995295 34999725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1917 6 306 Trihelix Transcription Factor Family AT5G14540 49.355 1.85e-75 247