Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1890 ATGCCATCTACTGCATTCCGTTATTTTGTGAAAAATATGCAGACCGTCACCCTCAGAGCATTCCCACCACCGCTGAAAATTCGAAACTGTGTATTTGTTGCTTATGTCGGTTTCTTTGGTGTGCCATCAATTTATTTCATTACTTTCGTTTTCCATTCCAGTGGAGCTTGTCAACACGATGTCGTTTCATTGCCTCTTTCTTCTTCACTCACAGCTTCTTGTCCTCACTCTTCATGGAACGATTTATGTCTCCTGTTTCCCTCTCTTCCTTGGCCTCGGCGAACCCCCCCAAAAATGGAGATTTCGGTGTCACTGTCTTCTTTGACCCCACGCATCAAACCTCTGCTTCTAAGCCCCATCACTAACCTCCCTCTACTATCGCGCCCATTGTCTTCTTTGGCTATCAACAACTTCCATTCTTTGCGTGGACTTCCATGCTGGAAATCTTCATACCCACCATCTTCTTTGCGCGTTAGTGCTCGAACATCAGCTTCTTTTCTCATTTCAAGTCGAAAAAATGCAACCTTTAAGGTCGCCTTTGCTTCGGTGCCTGAATCTAACAATGATGAGCCTAACAAACGCAATGCTCTAATTCACACTCTGCAACTTGGGGCCATGTTCGGAATTTGGTATCTCTTCAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCGACAGTTACAGCATTTCAGTTTGGTTTCACTACGTTGATGATTAATTTGATCTGGACGTTTAATCTCTATCCCAGACCAAAGATCAGTCGGTCACAGCTTGTAGCAATCATTCCGCTGGCTGTGGCTCACACAATGGGTAACCTGTTGACCAACATTAGTATTGGTAAGGTTGCTGTATCTTTCACTCACACCATCAAAGCCATGGAGCCTCTCTTCACTGTGGTTCTTTCTTCTCTGTTTCTCGGTGAGAGACCCACTCTCTGGGTGGTTTCTTCCCTTGTACCAATAGTTGGTGGAGTGGCATTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGGTTCTGTAGTGCTATGGCATCTAACCTTATTAACCAGTCACGAAATGTGTTGAGCAAAAAACTAATGGTCAACGAAGAGGAAACTTTGGACACTATAAATCTCTTCTCTGTCATAACCGTAATTTCCTTCATCTTGTCGCTTCCATTTGCCATTTATGTGGAAGGCTTCAAGTTTACTCCTTCATACCTGCAATCTGCTGCAAGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATCAATTTTGGCTGGGTTCTGCTTCCATGCCTATCAGCAGGTTTCTTATGGGATATTACAGATGCTGTCCCCGGTGAGTCACTCGGTTGGAAATTGTGTGAAGCGTGTGGTGGTCATAGTCTCCTCAGTTATCTTCTTTCAAAATCCCGTCTCACTCTCTAACACACTTGGAACTGCTGTGGCGCTTGCTGGAGTCTTGTTGTATTCCAGGGTTAAGCGTATAAAGCCGAAGCCAGCATAG 1515 0.4409 MPSTAFRYFVKNMQTVTLRAFPPPLKIRNCVFVAYVGFFGVPSIYFITFVFHSSGACQHDVVSLPLSSSLTASCPHSSWNDLCLLFPSLPWPRRTPPKMEISVSLSSLTPRIKPLLLSPITNLPLLSRPLSSLAINNFHSLRGLPCWKSSYPPSSLRVSARTSASFLISSRKNATFKVAFASVPESNNDEPNKRNALIHTLQLGAMFGIWYLFNIYFNIYNKQVLKVYPFPATVTAFQFGFTTLMINLIWTFNLYPRPKISRSQLVAIIPLAVAHTMGNLLTNISIGKVAVSFTHTIKAMEPLFTVVLSSLFLGERPTLWVVSSLVPIVGGVALASMTEVSFNWIGFCSAMASNLINQSRNVLSKKLMVNEEETLDTINLFSVITVISFILSLPFAIYVEGFKFTPSYLQSAASQGLNVRELCVRSILAGFCFHAYQQVSYGILQMLSPVSHSVGNCVKRVVVIVSSVIFFQNPVSLSNTLGTAVALAGVLLYSRVKRIKPKPA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1890 504 Pfam Triose-phosphate Transporter family 201 494 IPR004853 -
Glsi12g1890 504 PANTHER SOLUTE CARRIER FAMILY 35 202 498 - -
Glsi12g1890 504 SUPERFAMILY Multidrug resistance efflux transporter EmrE 419 498 - -
Glsi12g1890 504 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 201 503 IPR004696 GO:0016020|GO:0022857|GO:0055085
Glsi12g1890 504 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1890 Glsi-ChrGlsi12 34632330 34636870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1890 176 503 Antiporters AT5G33320 64.024 2.01e-141 411