Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1881 ATGCAAAACTTGCATGTGACGGATAAGCAAGATTCACGTGGCAGGTCGGCCACTCCAAGGAAACGTGGGGAAATTGAACAAGCTAGAGCTACCAATGGCGGTGCTTTCATGTTTCAGCAGCGCATCTCTTCACTTGCGCAAGTTACCAACTTTACGACTTTTATTATGCTTGCTGCTTTTTCTGAATTTCATCTTGCTCTCTGAATGAATGAGAAAAGCTTAATTGGAAACATAGTTTTTGGCAGAGTTTATGTTTACTTGCAAGAAGGAAGTGTGGGGAAATTGATTTACCATCAAAATTTTCAATTGCAATGGGAAGCAAGATTAAGGATTGCCATTAAGGTTGCTCAAGGCCTAGCATATATTCACAATGATTATGTTCCTCACTTGCTACACAAAAATTTCAAGTCAAACAACATTCTGCTAGATGCAAACTTTGAGCCAAAACTCATACATTTCTCTCTTGATCGAATTGTGGGAGAAGCTGCATTTCAGTCAACTTTTGCCCCTGAGGCATCATCTTCCTGTTATCATGCTCCAGAATATGGGTACACCCACTGCGAACGTGTTCACTCCACTGTGGAGTGTTCCCTGATGGCTGGAAAAACCCATTGCTCTAGAAAATTTTGGTGTGATCTGAAACTAGCTGTTAAATGTACCTTGCTTGAGACCTCATCCCATCGTAGAGATCGCGTTCCTCCCTCGTCGTTGTCTTTGTCTACCTACGAGGTTGGGCTCAAATGGGGTGATATCCAAGAAGGAAAACTTATCGCACTTGCGATTGGGTTTGTTCATTGGTCTAGTATTGTGACTCGTCTATATGATAAGTGTCTTGAAAGAAAGCGCTCCCAAAAATTATACACCGTTGAAAACAGGATAAAGGGAGGGAGGTGA 894 0.4206 MQNLHVTDKQDSRGRSATPRKRGEIEQARATNGGAFMFQQRISSLAQVTNFTTFIMLAAFSEFHLALXMNEKSLIGNIVFGRVYVYLQEGSVGKLIYHQNFQLQWEARLRIAIKVAQGLAYIHNDYVPHLLHKNFKSNNILLDANFEPKLIHFSLDRIVGEAAFQSTFAPEASSSCYHAPEYGYTHCERVHSTVECSLMAGKTHCSRKFWCDLKLAVKCTLLETSSHRRDRVPPSSLSLSTYEVGLKWGDIQEGKLIALAIGFVHWSSIVTRLYDKCLERKRSQKLYTVENRIKGGR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1881 297 MobiDBLite consensus disorder prediction 8 25 - -
Glsi12g1881 297 SUPERFAMILY Protein kinase-like (PK-like) 83 186 IPR011009 -
Glsi12g1881 297 PANTHER OS01G0750732 PROTEIN 73 193 - -
Glsi12g1881 297 Gene3D Transferase(Phosphotransferase) domain 1 87 197 - -
Glsi12g1881 297 ProSiteProfiles Protein kinase domain profile. 1 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g1881 297 MobiDBLite consensus disorder prediction 1 25 - -
Glsi12g1881 297 Pfam Protein tyrosine and serine/threonine kinase 83 182 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1881 Glsi-ChrGlsi12 34555155 34571000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1881 83 185 Receptor kinase-like Gene Family AT5G06940 54.369 3.83e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi12g1881 PK_Tyr_Ser-Thr 5.5e-07 CL0016