Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1871 ATGGTGCAGACAGGTTTCACTCTACATTCACTTGCTTTATGTTCAATCATGTTAAGTTGGAAGTTGGATATAGTGATGTCAAATTCATCTCCTTCCATATATTCAGCGTTATGTTGGAAAAGCTCTCGCAAGATGGAAGATAGTTTGAGGCTGAGACCAAAGTGCATATCAAAAGTGCATATCAAAAGGTATGCTGAGGCGGGTTTAAGAACTCTGGTAGTTGCATACCGTGAATTTAGTGAAGAGGAATACAAACTGTGGGAAGAGGAGTTTTTAAAGGCCAAAACTTCTGTTGCTGCAGACAGAGATGTATTGGTGGATGCTGCTGCTGATAAGATTGAAAGAAAGTTGATCCTTTTCGGTACTACAGCTGTTGAGGACAGACTGCAAAAGGGGGTTCCTGAATGTATTGATAAGCTTGCCCAGGCGGGAATCAAATTAAGGGTATTAACTGGGGACAAGATGGAAACTGCTGTCAACATAAGGTACGCTTGCAGTTTACTTAGGCAAGACATGAAACAGATAATGATTACTCTTGATTTACTAGATATCCTATCCTTGGAAAAACAAGGGGATAAGGAAGCTCTAACAAAGATAAAGTCTGAGAAACAGGGTTCTGATACAGCTAAAGAAAGTTCTGCTGCATTTGGTTCGATAATTGATGGGAAGTCCTTGGATTTTTCTCTTAAAAAGAATTTGGAGGTTACAAGATTGGTGAAATTGGGAACAGGTAAAAAAACACTATCTATTGGCGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCAATAGTGGTGCAGAAGGGATGCAGCCTGTGATGGCAAGTGATTTTGCAATAGCCCAATTCCATTTTCGTACATGGCCATTGGTGCATCTTAGAACTGTGTTTGTGAATGCATTGAATCGTGTCACATCTGTTGTTCAGATGAAGATTTAG 954 0.4046 MVQTGFTLHSLALCSIMLSWKLDIVMSNSSPSIYSALCWKSSRKMEDSLRLRPKCISKVHIKRYAEAGLRTLVVAYREFSEEEYKLWEEEFLKAKTSVAADRDVLVDAAADKIERKLILFGTTAVEDRLQKGVPECIDKLAQAGIKLRVLTGDKMETAVNIRYACSLLRQDMKQIMITLDLLDILSLEKQGDKEALTKIKSEKQGSDTAKESSAAFGSIIDGKSLDFSLKKNLEVTRLVKLGTGKKTLSIGDGANDVGMLQEADIGVGNSGAEGMQPVMASDFAIAQFHFRTWPLVHLRTVFVNALNRVTSVVQMKI 317
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1871 317 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 234 290 - -
Glsi12g1871 317 Gene3D - 116 293 IPR023214 -
Glsi12g1871 317 SUPERFAMILY HAD-like 114 294 IPR036412 -
Glsi12g1871 317 PRINTS P-type cation-transporting ATPase superfamily signature 143 153 - -
Glsi12g1871 317 PRINTS P-type cation-transporting ATPase superfamily signature 250 269 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g1871 Glsi-ChrGlsi12 34496505 34498638 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1871 57 290 Primary Pumps ATPases AT3G27870 61.538 5.47e-101 316