Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1861 ATGGACAGCAGAATTGAGTACGCAGAAACTCACAGGAATAGGTGTGCAGCTTGCTTCGGCAAACAGTTCAACAAAAAGGAGCACCTTGTGGAGCACATGAGGATCTCCTACCATTCGGTTCACGAACCAACCTGTGGCATTTGCAGGAAACACTGCAGGTCATTTGAGTCTCTGAGGGAGCACCTTATAGGTCCATTGCCAAGACAAGAATGCAGAGAAGTTTTTGCCAACCGAGGATGCAAGTTTTGTTTGAAGGTCCTTGATAGCCCTCACGCTCGAAGGATTCACCAAGAAAGATGCCAACTCTCGGGAACAAATGCTGGACTAAATGCTCGCTTTTCAAACTTGGGCTTTCGTGATAATCTGACAATTGGAGGGAGAGGACCACAAGTAGTTGCACTTGCTTGCAAAATGGTTGGAGGTGGCAGTGATGGCTCACTAGATCTCTGTGCAAGAGTCTGCATAATTGATGAACATGAAAACATCATCTTCCATTCTTTTGTGAAGCCACCAATTCCTGTCACAAACTACAGGTATGAGACAACAGGTATTCGACCAGAATACTTAAGGGATGCCATGCCAATGAGGCAAGTGCAAAGGAAGATTCAAGACTTCCTCTGCAACGGGGAACCCATGTGGAAGATTCGACCAAAAGTTGGAAAAGCCAGACTTCTTGTAGGTCATGGTGTAGATCATGACCTAGAATGTTTGCAAATAGAATATCGAGCAGAAATGATCAGGGACACTGCAAAATACCCTCCATTGATGAAAACGAGCAAGCTCAGCAACTCGCTCAAGTACCTGACACAAGCATATCTTGGGTATGACATTCAAATTGGAATACAGGATCCTTATGAGGATTGTGTAGCAACGATGAGGCTGTACATGAGGATGAGATCCCAAGTACACAGAATAGAGGATTACCCTTTGGCTTCTGATCCGCAAAACAGGAACAACTTTGCTTCGTGGAGGCAAAGTGAGCTTGAAAGAATGACCCCTGAACAATTGCTGGAAATCTCAAGGTCTGACTACTATTGCTGGTGCCTGGATTCCATCTAA 1059 0.4504 MDSRIEYAETHRNRCAACFGKQFNKKEHLVEHMRISYHSVHEPTCGICRKHCRSFESLREHLIGPLPRQECREVFANRGCKFCLKVLDSPHARRIHQERCQLSGTNAGLNARFSNLGFRDNLTIGGRGPQVVALACKMVGGGSDGSLDLCARVCIIDEHENIIFHSFVKPPIPVTNYRYETTGIRPEYLRDAMPMRQVQRKIQDFLCNGEPMWKIRPKVGKARLLVGHGVDHDLECLQIEYRAEMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQIGIQDPYEDCVATMRLYMRMRSQVHRIEDYPLASDPQNRNNFASWRQSELERMTPEQLLEISRSDYYCWCLDSI 352
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1861 352 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 20 350 IPR047021 GO:0004527
Glsi12g1861 352 SUPERFAMILY Ribonuclease H-like 144 299 IPR012337 -
Glsi12g1861 352 FunFam RNA exonuclease 4 127 314 - -
Glsi12g1861 352 Pfam Exonuclease 148 272 IPR013520 -
Glsi12g1861 352 Gene3D - 128 310 IPR036397 GO:0003676
Glsi12g1861 352 SMART exoiiiendus 130 304 IPR013520 -
Glsi12g1861 352 ProSiteProfiles Zinc finger C2H2 type domain profile. 13 43 IPR013087 -
Glsi12g1861 352 CDD REX4_like 132 295 IPR037431 GO:0006364|GO:0008408
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g1861 Glsi-ChrGlsi12 34444633 34446282 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1861 1 352 C2H2 Transcription Factor Family AT5G40310 73.950 0.0 570