Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1859 ATGGCTGCCGCTTCTACTCCCACTGCACCATCCCACATCAAAGCTTGGGTCTATTCTGAATACGGAAAATCAGCTGATGTTCTCAAGTTTGATCCTAATGTTCCTATACCTCAAGTCAAGGAAGACCAGGTACTCATCAAGGTCGTCGCTGCAGCCCTTAATCCCGTTGACTATAAGAGAATGGATGGGTATTTCAAGCACACTGACTCTCCTTTTCCTCCTGTTCCAGGATATGACGTTGCTGGCGTAGTGGCGAAAGTGGGAAGTCAAGTGAAGAAATTTAAGGTTGGGGACGAAGTATATGGTGACATCAATGAGCATGGTTTGGATCACCTAAAGGTCTTTGGCACTTTGGCGGAGTATACAGCTGCAGAAGAAAAAGTGTTGGCCGACAAGCCACCAAATCTGAGCTTCCTTGAGGCCGCTAGCCTTCCTTTAGCCATCGAGACTGCTTATGAAGGCCTTGGGCGTTCTGAGTTTTCTGCTGGGAAATCCATCCTTGTTCTGGGAGGTGCTGGTGGAGTTGGAACCCATGTTGTTCAGGTATCTCCGCCAGCTATCGCGTTCATACTTACCTCTGATGGGGCTATCCTAGAAAAACTAAGACCCTACTTTGGGAGTGGGAAGGTGAAGCCAATACTGGATCCCAAGAACCCCTTTCCATTTTCTAAGACCCTTGAAGCCTTTTCGTACCTGGAAACTGGCAGAGCCACAGGAAAAGTAGTCATCTATTCCATCCCATGA 744 0.4785 MAAASTPTAPSHIKAWVYSEYGKSADVLKFDPNVPIPQVKEDQVLIKVVAAALNPVDYKRMDGYFKHTDSPFPPVPGYDVAGVVAKVGSQVKKFKVGDEVYGDINEHGLDHLKVFGTLAEYTAAEEKVLADKPPNLSFLEAASLPLAIETAYEGLGRSEFSAGKSILVLGGAGGVGTHVVQVSPPAIAFILTSDGAILEKLRPYFGSGKVKPILDPKNPFPFSKTLEAFSYLETGRATGKVVIYSIP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1859 247 SUPERFAMILY GroES-like 11 170 IPR011032 -
Glsi12g1859 247 Pfam Zinc-binding dehydrogenase 192 243 - -
Glsi12g1859 247 SMART PKS_ER_names_mod 23 243 IPR020843 GO:0016491
Glsi12g1859 247 Pfam Alcohol dehydrogenase GroES-like domain 42 103 IPR013154 -
Glsi12g1859 247 Gene3D - 20 154 - -
Glsi12g1859 247 Gene3D - 195 243 - -
Glsi12g1859 247 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 182 247 IPR044626 GO:0016628
Glsi12g1859 247 Gene3D - 155 182 - -
Glsi12g1859 247 Gene3D - 184 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1859 Glsi-ChrGlsi12 34436880 34437977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1859 66 100 Monolignol Biosynthesis Gene Families AT1G72680 57.143 1.73e-07 49.3