LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g1838	ATGGAAATATCAGATCCGAGTCAACCCGCACGAGTTGTAGTAATTGTTGTCACTGCTGTGAAACTGAATCGTGGGTACATTATCAGAGGCAATGGATGCTCTGTATTTCTGAGACAGCCCCTCATGGATCTGGAGTCTGTGATCTACAAAAATCCAATTAAGAAGGAATCGTGGAAGACATTATTAACTTTGGCTTACCAAAGTTTGGGAGTAGTGTATGGAGATTTGAGCACCTCCCCTCTTTACGTTTACAAAAGCACTTTTGCCGAGGATATTCAGCATTCAGAGACTAATGAAGAAATATACGGGGTTTTGTCTTTTGTATTCTGGACGCTTACACTGATACCACTGGTCAAGTACGTGTTCATTGTGCTTCTAGCAGATGACAATGGCGAAGGAGGGACTTTTGCTTTGTATTCCTTGCTCTGCCGGCATGCCCGGGTCAGCTTTCTGCCAAATACCCAACTCGCAGATGAAGACTTGACGGAGTATACGAAAGATGGAATTGTACCAGCCAATAAGAAAAATGTTGGGTCTGGCTTGAAATCGGTATTGGAGAAACACAGGGTGTTGCAGAGGGTACTGCTTATTCTGGCTTTGATAGGAACTTGCATGGTTATTGGGGATGGCGTGCTCACACCAGCGCTTTCTGTGTTTTCTGCTGTGTCAGGCCTCGAGCTTTCCATGTCAAAAGAGCAGCACCGATATGTTGAGGTTCCAGTAGCTTGTATTATACTGGTATTTTTGTTTGCCCTCCAACATTATGGGACCAACCGTGTGGGATTCTTGTTTGCACCTGTCGTGATGACCTGGCTGCTATGCATCAGTGCCATTGGTGTTTATAATATTTTCCATTGGAATCCACATGTATATGAAGCTCTCTCCCCATATTATATGTTCAAGTTTCTGAGAAAAACCCAAAGGGGAGGTTGGATGTCCTTGGGTGGGATTCTACTGTGTATAACTGGTTCAGAAGCCATGTTTGCTGATCTAGGACACTTTTCACAATTGTCAATTAAGATTGCTTTCACCTTTTTGGTATACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCGTATCTTTCCAGGCATCATTCCCTTGAAAGTGACTACAGAATTGGTTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGGAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCTTTGGGCTGCTTCCCCAAAGTCAAAATCATTCATACATCATCTAAGATACATGGTCAGATTTATATTCCAGAGATCAACTGGACTTTGATGCTACTTTGCCTGGCCATTACTGTTGGATTTAGAGATACAAAACGCATGGGAAATGCATCAGGTTTGGCTGTCATAACCGTCATGCTGGTGACCACTTGCCTAATGTCTCTAGTTATAGTCTTATGCTGGCACAAAAGTGTTCTCCTAGCCATTTGCTTTATATTCTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATTAAGTTCCTTGAAGGGGCTTGGGTTCCTATTGCCCTCTCGTTTATCTTCCTTATTGTCATGTATGTATGGCACTATGGTACACTTAAGAAGTATGAGTTTGATGTTCAAAATAAGGTCTCCATCAACTGGCTCCTTGGGTTGGGCCCCACTCTTGGAATTGTACGGGTTAAGGGAATTGGCCTCATACACACTGAGCTTGTATCTGGGATCCCCGCTATTTTCTCTCACTTTGTTACCAATCTTCCAGCTTTCCATCAGGTTGTAGTTTTCCTCTGCATCAAATCTGTCCCGGTGCCACATGTCAGACCTGAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAAGGAGTATCGGCTTTATAGGTGCATAACACGCTATGGTTATCGTGATATTCACAAGGATGACATAGAGTTTGAGAAGGATCTTGTTTGCAGTATAGCGGAATTTATCCGATCAGATATTTGTGAATATGGCTTAGGATTAGATAATTTTGAAGATGACACAAAGATGACGGTTGTTGGGACTTCAGCGTCAAAATTAGAAGGTATAAGAATGTGTGAGGATGATCCAGATTCTTCTCAAATGGAAGGTACTTCAGAGTTGAGGGAGGTCAAATCTCCTGAAAAGGTTAGGAAGCGAGTGAGGTTTGTTGTGCCAGACAGTCCACAGATTGATTTGGGTGCAAGGGAGGAGTTGCGAGAGCTAATGGAAGCAAGGGAAGCAGGAATGGCATTCATAATGGGTCACTCGTATGTGAGAGCAAAAAGAGGATCAAGTTGGATAAAGAAAGTTGTGATCAATTATGGCTATGATTTCTTAAGGAGAAACTCTAGAGGACCAACATATGCCTTAAGCATCCCTCATGCATCTACCCTAGAGGTGGGCATGATCTATCATGTCTGA	2451	0.4296	MEISDPSQPARVVVIVVTAVKLNRGYIIRGNGCSVFLRQPLMDLESVIYKNPIKKESWKTLLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLVKYVFIVLLADDNGEGGTFALYSLLCRHARVSFLPNTQLADEDLTEYTKDGIVPANKKNVGSGLKSVLEKHRVLQRVLLILALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEQHRYVEVPVACIILVFLFALQHYGTNRVGFLFAPVVMTWLLCISAIGVYNIFHWNPHVYEALSPYYMFKFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSRHHSLESDYRIGFYVSVPEKIRWPVLGIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCITRYGYRDIHKDDIEFEKDLVCSIAEFIRSDICEYGLGLDNFEDDTKMTVVGTSASKLEGIRMCEDDPDSSQMEGTSELREVKSPEKVRKRVRFVVPDSPQIDLGAREELRELMEAREAGMAFIMGHSYVRAKRGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g1838	816	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	55	815	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi12g1838	816	Pfam	K+ potassium transporter	66	646	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi12g1838	816	NCBIfam	potassium uptake protein	64	816	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g1838	Glsi-ChrGlsi12	34310887	34317444	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g1838	42	814	Inorganic Solute Cotransporters	AT5G14880	78.306	0.0	1243