Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1831 ATGTCGCAAGGTTACGCTATTGAGCTTTACTTTGATCCTGCGCTGGAAAACCAGGTGCTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATTAGTACCCAACTCATCGATATTGAGTCTCGCCCTCATATCACTCTCTTCTCCACCCCATTTATCGATCCCGCGAAGCTTGAATCCATTGTTAAGAGTTTCGCTGCCAAGCAAGAACCTTTACCTCTGTCTTTCTCTTCAATTGGGTGCCTACCGAACGAAAATAATGTCCTCTTTCTTGCACCGACACCTTCAATCTTGCTACTTCAGTTCCAATCGCAATTGTGTGATGCAATGAAGAAAGAAGGCATCGAGATAGGAGAGGAGTATCGCCCAGATTCTTGGATTCCTTATTGCTCGGTTGCTCAGGAATTGCCAAAAATTAGGATGGCCGATGCGTTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTTCTGGGTATGCCATGGATATTGGGCTGGTGGAGTTCTCACCCGTCCGTGAGCTCTTCTCATTTGTGCTTGGCAACACAGTAGAAGCATGA 552 0.471 MSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIDIESRPHITLFSTPFIDPAKLESIVKSFAAKQEPLPLSFSSIGCLPNENNVLFLAPTPSILLLQFQSQLCDAMKKEGIEIGEEYRPDSWIPYCSVAQELPKIRMADAFCVLRDLKLPVSGYAMDIGLVEFSPVRELFSFVLGNTVEA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1831 183 PANTHER - 1 181 - -
Glsi12g1831 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Glsi12g1831 183 Pfam 2'-5' RNA ligase superfamily 41 156 - -
Glsi12g1831 183 SUPERFAMILY LigT-like 4 150 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1831 Glsi-ChrGlsi12 34281324 34281875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1831 1 183 Calmodulin-binding Proteins AT5G40190 72.131 5.00e-95 272