Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1785 ATGAAAAGAATACTGAAGCAGGTACCTCCCGAGCAAAGAGACGAGGCCATGGATTCCATTATCTTTGAGTCCGATATGCGTGCACGATACCCCGTTGATGGGTGTTTGGGCGTTACAAGGCATTATCAATATCTGCTGCATAAGGCCACTGAAGAATTGCATTATGTAAAAATGAAACTTGCTTTCTATAAAGAAGAATTCAGTCTTTCTTATCAAACGCCTCCCCTTTCCTTTGAAATGCCTTCAATCAGCGAGCTTCCAATTTATAACCATTTACAATATAAGAATGAAGAATTTCCAATAGTGGATGGCAGTGGAGTTTACGGCGATGCAGCTTATATTGACGCTGAAAATTATAACTTGACGAAACCCATTGTTGCCCTTCCTCATAGTAATGAAGGCGTCAGCATCACTAATGTTAGCTCTAATGCTATGGGTGCGCAGCCGAATTCAATAGCAGTCGGAGGGTTATCCAATCAACAAGAATTAGATGCTCTTGTTAATTACGAAGACATTCCCTTGGATGAATGGGAGTCAAGTGGGGAATCATCGTTCAAAGTGGCAACACAACATATTGAACATGTTTCTAAGAATGAACTCAAGGATGCAGCGGCGTTCTTCAGCTACTTTAAGTCCATGCCTAAGCCCTTAGATGATCAGGATAATGATGTTGTTCTTTCGCAAGACATGCCTACAGAAAGTAAAGCAGAGATAAGAGATGCCTTGCTTTGGAGGTTGCCCTCTGTTCTACCATGGCAAACTTTGAAGAAGCAAGATTCTTATGGCCATCTCGTGCGTGCTTGCTACTTCATATTTACATTTATCTCACTCCGCTCTGAATTGGAGCATTTTGCGTGGAACTTAACAGAAGAAGCTAACGGGGGCAACAATCTAAATATCATGCTTCTAGTTTTAGAAGATGAAGAAAGGGTGGGCTCTAAATTGAACCCAAATAGGAACCACTTCACTCCATTTAAAGTTGAAAGCGTGGCAATTCCACCCAGTTTGAGGATACTACCTTCGGATCCATTAACACCAAAGACTCCAAAGTCACGAACTTTGCCTAAATTTGAATCCAATTTCTTAGCCATTCTCTGTGTTTTCAATATACAGGAGCAAGCAAGAGTAGTAAAGCTACCAAATTACCCCTTCAGTCACGGCGAGAAAAAGAGTGAGAGAGAGAGAGGTAAAGAGTCTTCTCACAGCCACCGTCTCTTCTTTCTCACCCAACTTCCAATTGCTCATTCTTCGCTACCTAGCTGA 1263 0.4181 MKRILKQVPPEQRDEAMDSIIFESDMRARYPVDGCLGVTRHYQYLLHKATEELHYVKMKLAFYKEEFSLSYQTPPLSFEMPSISELPIYNHLQYKNEEFPIVDGSGVYGDAAYIDAENYNLTKPIVALPHSNEGVSITNVSSNAMGAQPNSIAVGGLSNQQELDALVNYEDIPLDEWESSGESSFKVATQHIEHVSKNELKDAAAFFSYFKSMPKPLDDQDNDVVLSQDMPTESKAEIRDALLWRLPSVLPWQTLKKQDSYGHLVRACYFIFTFISLRSELEHFAWNLTEEANGGNNLNIMLLVLEDEERVGSKLNPNRNHFTPFKVESVAIPPSLRILPSDPLTPKTPKSRTLPKFESNFLAILCVFNIQEQARVVKLPNYPFSHGEKKSERERGKESSHSHRLFFLTQLPIAHSSLPS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1785 420 MobiDBLite consensus disorder prediction 385 402 - -
Glsi12g1785 420 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 129 - -
Glsi12g1785 420 MobiDBLite consensus disorder prediction 383 402 - -
Glsi12g1785 420 Pfam Lateral organ boundaries (LOB) domain 3 56 IPR004883 -
Glsi12g1785 420 ProSiteProfiles LOB domain profile. 1 60 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1785 Glsi-ChrGlsi12 33968453 33976610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1785 3 64 AS2 family AT3G47870 48.387 5.58e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi12g1785 LOB 1.1e-09 No_clan