Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1768 ATGTTTGAAAGAATGGTATTGGTAGGTTTATCATTTTCATCATTAGAGACTGCCGCATTAGCCTGTGGCGAAATCGTACCTTACCCAGTCCGTGCGTTAAAAATAGGCAACTCTTTTGGCTGCTTAGATTTCTTTGGACGCTACCTCTTTACTGCATCAATGTCTTTTCCAGAAGTTGGTGAGACAAAATTGGAGAGGTTTGGTGGATCTGCACCCTTCGGATCCCGTGCTCGTCTTGCCATAATGTACGGCTTCGAAGCTCTTACGTTCAACATTCATGGCGGTTACCTGGAGGCCATCGTGCGGGGACACCGGGCTGGGTTGCTCACCGCCGCTGATTACAACAATTTGTGCCAATGTGAAACCCTTGAAGACATCAAGATGCATCTTTCCGCCACTGAGTACGGCCCTCACCTGCAAAATGAACCATCTCCATTGCATACAACTACAATTGTGGAGAAATGTACTCTTAAACTGGTTGATGATTATAAACACATGTTATGCCAAGCAACAGAACCCTTGTCAACCTTTTTAGAGTATATTACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGCACCTTGCATGAGAGAGATGTTCAAGAACTATTAGAAAAATGCCATCCACTGGGCATGTTTGACAGCATTGCTACTCTGGCTGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTACTTGTGGACACTCCACTGGCTCCATATTTCTCTGAGTGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGAGGAACACACTTTACAAAGCATATCTTGAAGACTTTTACAAATTTTGTCAGAAACTTGGTGGTGCCACTGCTGAAATCATGTCTGACCTTTTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATCACCATAAATAGCATTGGCACTGAGCTCACCAGGGATGATCGTAGAAAATTGTACTCTAATTTTGGTTTACTTTACCCTTATGGTCATGAGGAGCTTGCTGTCTGTGAAGATATTGATCAGGTTCGTGGTGTAATGGAAAAATACCCCCCTTATCAGTCTATTTTTGCTAAGTTATCATATGGAGAGAGCCAGATGCTTGACAAGGCGTTCTATGAGGAGGAGGTGAAGAGGCTTTGCTTAGCTTTTGAGCAACAGTTCCATTATGCTGTGTTTTTCGCATATATGAGGTTAAGGGAGCAGGAGATTAGGAACCTAATGTGGATTTCAGAATGCGTTGCTCAAAATCAGAAGTCCAGAGTTCATGACAGCGTTGTCTTCATATTTTAG 1299 0.4265 MFERMVLVGLSFSSLETAALACGEIVPYPVRALKIGNSFGCLDFFGRYLFTASMSFPEVGETKLERFGGSAPFGSRARLAIMYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLEDIKMHLSATEYGPHLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1768 432 FunFam V-type proton ATPase subunit 287 390 - -
Glsi12g1768 432 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 82 432 IPR016727 GO:0033179|GO:0046961|GO:1902600
Glsi12g1768 432 Gene3D - 172 276 IPR035067 -
Glsi12g1768 432 SUPERFAMILY V-type ATP synthase subunit C 95 430 IPR036079 -
Glsi12g1768 432 FunFam V-type proton ATPase subunit 95 209 - -
Glsi12g1768 432 FunFam V-type proton ATPase subunit 172 286 - -
Glsi12g1768 432 Gene3D - 287 390 IPR035067 -
Glsi12g1768 432 Gene3D ATP synthase (C/AC39) subunit, domain 3 95 416 IPR044911 -
Glsi12g1768 432 Pfam ATP synthase (C/AC39) subunit 97 425 IPR002843 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1768 Glsi-ChrGlsi12 33853377 33861282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1768 82 432 Primary Pumps ATPases(2) AT3G28710 94.302 0.0 706