Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1734 ATGCATCAACACAATCGCTTCGAAGATGCAGACGAAGTCGTTGAGGAAGCTGATGCCATTGAGGATGCTAATGCCATTGAGGATGCTAATGTCATTGAGGATGCTGATGCGAGCTACAATCTCGACGACTCCATCTACGAGCCCGATGGTTCCGTAGACAAAGCCACCGAAGGCTCAGTTGCCGAGCCTGTCATGGCCTTTATCGATTCGGATGATAAAACGAGTGCCGACTATTACTTCGATTCCTACTCTCACTTTGGAATTCACGAAGAAATGTTGAAGGACACGGTAAGAACCAAGACATATCAAAATGTTATTTATCATAATAAGTTCTTATTCAAGAATAAAGTAGTTCTCGATGTGGGTGCTGGGACTGGAATTTTGTCACTATTTTGTGCCAAAGCAGGGGCAGAACATGTCTATGCGGTTGAGTGCTCTGATATGGCTGACATGGCAAAGGAGATAGTTGAAGCTAATGGGTACTCTAATGTGATAACTGTTCTAAAAGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTGAATACTGTCCTCTATGCACGTGACAAATGGCTAGTGGATGATGGAATTGTGCTACCAGATAAAGCGTCCCTCTATGTTACCGCAATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCAATTATGGAGCCACTTGTTGACACAGTTGACAAAAATCAGATTGTTACAAATTGCCAGCTACTTAAGACTATGGATATCTCTAAGATGGTGCCTGGAGATGATTCCTTCACAGCACCTTTTAAGCTTGTAGCTGAACGTGATGATTATATTCATGCTCTTGTCGCATATTTTGATGTATCATTCACAAAGTGTCATAAATTGATGGGCTTCACTACAGGGCCACGATCGCGTGCTACACATTGGAAGCAAACAGTCCTTTATCTAGAAGACGTGTTGACAATATGTGAGGGAGAGGCAATTGTAGGCAGCATGACCGTGGCACCAAATAAAAGAAATCCTCGGGATGTTGACATAATGCTCAAGTATTCATTAAATGGTCGGCGATGCATGGTTTCAAGGGTTCAGTATTACAAGATGCGCTGA 1194 0.4137 MHQHNRFEDADEVVEEADAIEDANAIEDANVIEDADASYNLDDSIYEPDGSVDKATEGSVAEPVMAFIDSDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYHNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSDMADMAKEIVEANGYSNVITVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYVTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDKNQIVTNCQLLKTMDISKMVPGDDSFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFTTGPRSRATHWKQTVLYLEDVLTICEGEAIVGSMTVAPNKRNPRDVDIMLKYSLNGRRCMVSRVQYYKMR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1734 397 Gene3D Vaccinia Virus protein VP39 67 219 IPR029063 -
Glsi12g1734 397 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 76 376 IPR025799 GO:0016274|GO:0018216
Glsi12g1734 397 FunFam Blast:Protein arginine N-methyltransferase 1 221 397 - -
Glsi12g1734 397 Pfam Ribosomal protein L11 methyltransferase (PrmA) 113 188 - -
Glsi12g1734 397 Gene3D - 221 397 - -
Glsi12g1734 397 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 33 384 IPR025799 GO:0016274|GO:0018216
Glsi12g1734 397 FunFam probable protein arginine N-methyltransferase 1 67 219 - -
Glsi12g1734 397 CDD AdoMet_MTases 118 218 - -
Glsi12g1734 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 396 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1734 Glsi-ChrGlsi12 33629481 33634337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1734 58 360 C2H2 Transcription Factor Family AT3G12270 38.110 7.55e-65 216