Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1729 ATGTATTCTTTGGCTACACAGAGCAGGAGCGAGGGAGAGAGTGAATTAGGGATGGGGAGGAGGATACTGAATGACGCATTGAGAACTATGGTGAATGCAGAGAAGAGGGGAAAAGCTAGTGTGGATTTGAAGCCCATCTCCACTGTTATGTCCTCCTTTCTCAGGATCATGAAAGACCGAGGCTATATCAAGGACTTTCAAGTCTATGATCCGCATAGAGTGGGGAGGATAACAGTTCAACTACAAGGCAGAATTAAGGATTGCAAGGCCCTTACATACCGACAAGACATCAAGGCAAGGGATATTGAAAACTACAAATTGCGTATTCTTCCAACACGGCAGTGGGGTTATGTTGTGGTTACAACCCCTGATGGCGTTTTGGATCACGAAGAGGCCATTAAACGGAATGTAGGTGGTCAGGTTCTTGGTTACTTTCACTAG 441 0.4558 MYSLATQSRSEGESELGMGRRILNDALRTMVNAEKRGKASVDLKPISTVMSSFLRIMKDRGYIKDFQVYDPHRVGRITVQLQGRIKDCKALTYRQDIKARDIENYKLRILPTRQWGYVVVTTPDGVLDHEEAIKRNVGGQVLGYFH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1729 146 FunFam 40S ribosomal protein S15a-5 86 146 - -
Glsi12g1729 146 Pfam Ribosomal protein S8 23 144 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi12g1729 146 PANTHER 40S RIBOSOMAL PROTEIN S15A 18 145 IPR000630 GO:0003735|GO:0005840|GO:0006412
Glsi12g1729 146 FunFam 40S ribosomal protein S15a 18 85 - -
Glsi12g1729 146 Gene3D - 18 85 - -
Glsi12g1729 146 SUPERFAMILY Ribosomal protein S8 20 146 IPR035987 GO:0003735|GO:0005840|GO:0006412
Glsi12g1729 146 Gene3D - 86 146 - -
Glsi12g1729 146 ProSitePatterns Ribosomal protein S8 signature. 116 133 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1729 Glsi-ChrGlsi12 33614197 33615349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1729 18 146 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 83.721 1.41e-82 237