Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1704 ATGAAGATTGAGGAATTGGACGATGTCGATTCCAGTAGGGACGAAGGTAATTATGACAACCAGATCGTGAGGGTTGACGCTAAGAGAGCGTTAGTTGGGGCAGGTGCCCGGATACTGTTTTACCCGACTCTTTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATGAAGTCGATGAGTTTTTATTGTTGGGCGCTGTTCCATTCCCCAAAGATGTCCCACGCTTGAAGAAGCTCGGTGTGGGTGGTGTAATTACTTTGAATGAACCTTATGAAACGTTAGTACCATCATCATTATATCATGCTCATGGGATTGATCATTTAGTGATTCCCACAAGAGATTATCTCTTTGCCCCTTCATCTGTGGACATCAGCAGGGCTGTGCAATTCATTTATCAGAATGCCTCTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGTCGGGGAAGGAGTACGACAATTGTTCTTTGTTATTTGGTTGAACACAGGCACATGACACCTGCTGCCGCCCTGGAATATGTGCGGTCCCGTAGACCTAGGGTGCTACTAGCACCATCACAGTGGAAGGCTGTTCAAAACTATAGCATGCATCTACCATCTCCTACTCCACCCTCTCCCTCGGGTGATGCAGTTCTTATAACGAAAGCTGACCTTGAGGGTTACCATAACACATGTGATGCTGGTATGGAGCTGGCCATTGTTCCCAAAGTGCGGAAGGCTAAGCCCATGATAGCAAGACTATCTTGCTTGTTTGCATCCCTGAAAGTTTCTGGTAGTAGTGCACCAGTAGTCAGGCGGCTGCCAGTTTCAGAGGCACGTGCCTGCTAA 846 0.4669 MKIEELDDVDSSRDEGNYDNQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIEAEFRWWDEVDEFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSSVDISRAVQFIYQNASCGKTTYVHCKAGRGRSTTIVLCYLVEHRHMTPAAALEYVRSRRPRVLLAPSQWKAVQNYSMHLPSPTPPSPSGDAVLITKADLEGYHNTCDAGMELAIVPKVRKAKPMIARLSCLFASLKVSGSSAPVVRRLPVSEARAC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1704 281 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Glsi12g1704 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 203 IPR029021 -
Glsi12g1704 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Glsi12g1704 281 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 259 - -
Glsi12g1704 281 FunFam Dual specificity phosphatase domain protein 59 205 - -
Glsi12g1704 281 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Glsi12g1704 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Glsi12g1704 281 Pfam Dual specificity phosphatase, catalytic domain 81 200 IPR000340 GO:0008138|GO:0016311
Glsi12g1704 281 CDD PTPMT1 59 201 IPR044596 GO:0004721
Glsi12g1704 281 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1704 Glsi-ChrGlsi12 33463721 33465373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1704 1 261 Protein tyrosine phosphatase (PTP) family AT2G35680 51.429 3.90e-101 297